Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5069g00003 ATGGAGTCAAGAGGGAAAGGAGGAAGAGGAGAGGCGTGCGAGGAGGAGGAATCTCCGAGAGGCGTGCTGGAGATGATGGGGGAGGCAGATCGGGGGAGCAGCGGATGCAGCACGTGCTCGGGGGAGAAGGCAACGGGGACGGGGACGGGGGCGGGGGCGGGGGCGGAGAGGCCGCCGTCGGGGAGGGAGGGGCAGATGCCGCAGTGGAAGGGAGTGATGGACGCGTTGAGGATAAACTCAGTGAAGAGGCTGTCGGCGATACCGTTGTTCGCGTCGACGTACATGATATCTCGCAAGAGCCTCAGGAAGTTGGCGCGCATCAGAAGCGCAGAAGACGCCATAGATCTTGTTTCTTTGGCCACCAAATCCTCCTGGAAAACCTTCCATTACTCCGACCTTGCCGCTGCCACCGACGATTTCAGTCCTGAGAACTTGATCGGGAAAGGCGGGCATGCGGAGGTGTACAAAGGACGCTTACCAGACGGGCAAATTGTGGCAGTAAAGAAGCTTGTGAACGAGGAAAAAGATGACGCAGATAACACTGGTGATTTCTTGACGGAGCTTGGAATCATCGCCCACATCAGCCATCCTAATGCTTGCCAATTGATTGGCTTCGGCATCGACAAGGGCCTCTTCTTTGTCCTTCACTATGCCGCTCATGGCAGCCTTTCCTCACTTCTCTTCGGTTCCAAAAAGCTGGAGTGGAATGTTAGGTTCAAGGTAGCCATTGGAATTGCAGAGGGACTGCAGTATCTCCATCATGAATGCCCAAGACGAATCATTCACAGAGACATCAAGGCTTCCAACATTTTGCTTAATGAAAACTACGAACCTGAGATTTCAGATTTTGGATTGGCAAAGTGGCTCCCGGAGAAGTGGGACCACCATGTCGTGTTCCCCATAGAAGGCACATTTGGGTATCTAGCTCCAGAATATTTCATGCATGGACTCGTGGATGAAAAGACCGATGTGTTCGCTTATGGGGTTTTGTTACTGGAGATCATCACAGGTCGTATGGCTGTTGATTCTGACAGTAGGCAAAGTCTTGTGATTTGGGCAAGGACTCTACTGGATGCGAAAAACATGAAGGAATTAGCAGACCCTAGATTAGAAGATGATTACGATCCTATAGAAATGGAGCGTGCCATGGTTACTGCTTCCATGTGCGTACACCACTCAGCCGCCAAGCGTCCCCTCATGAATCGGGTAGTGCAGATGCTGAAGGGGGAGGAAGGACCCATTGAAGTAAAGCCACAAAAATCCTTGGCCCCAAGATCCCTCATGTTGGATGCCTGTGATCTTGAAGATTATACTTGCTCCAATTACTTGAATGATCTCAATCGTCACAGGCAACTAATCATGGAGTGA 1368 0.5154 MESRGKGGRGEACEEEESPRGVLEMMGEADRGSSGCSTCSGEKATGTGTGAGAGAERPPSGREGQMPQWKGVMDALRINSVKRLSAIPLFASTYMISRKSLRKLARIRSAEDAIDLVSLATKSSWKTFHYSDLAAATDDFSPENLIGKGGHAEVYKGRLPDGQIVAVKKLVNEEKDDADNTGDFLTELGIIAHISHPNACQLIGFGIDKGLFFVLHYAAHGSLSSLLFGSKKLEWNVRFKVAIGIAEGLQYLHHECPRRIIHRDIKASNILLNENYEPEISDFGLAKWLPEKWDHHVVFPIEGTFGYLAPEYFMHGLVDEKTDVFAYGVLLLEIITGRMAVDSDSRQSLVIWARTLLDAKNMKELADPRLEDDYDPIEMERAMVTASMCVHHSAAKRPLMNRVVQMLKGEEGPIEVKPQKSLAPRSLMLDACDLEDYTCSNYLNDLNRHRQLIME 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5069g00003 455 ProSiteProfiles Protein kinase domain profile. 140 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5069g00003 455 Gene3D Transferase(Phosphotransferase) domain 1 219 420 - -
Pral5069g00003 455 SMART serkin_6 140 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5069g00003 455 Gene3D Phosphorylase Kinase; domain 1 99 217 - -
Pral5069g00003 455 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 219 421 - -
Pral5069g00003 455 MobiDBLite consensus disorder prediction 1 24 - -
Pral5069g00003 455 SUPERFAMILY Protein kinase-like (PK-like) 121 407 IPR011009 -
Pral5069g00003 455 MobiDBLite consensus disorder prediction 1 67 - -
Pral5069g00003 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Pral5069g00003 455 Pfam Protein kinase domain 143 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5069g00003 455 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 117 217 - -
Pral5069g00003 455 ProSitePatterns Protein kinases ATP-binding region signature. 146 169 IPR017441 GO:0005524
Pral5069g00003 455 PANTHER OS08G0249100 PROTEIN 13 422 IPR046958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5069g00003 Pral-Chr5069 28915 32525 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5069g00003 126 410 Receptor kinase-like Gene Family AT1G34210 42.034 3.71e-66 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pral5069g00003 Pkinase 1.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5069g00003 - - gmx:100775930 579.326