Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5068g00004 ATGGCATCAATCACTTTTAAGCTACTCTTTACCCTCACTCTATTTTCTTCTCTTTTCTCAATATCATCATCATCCTCTTCTTCTTCATTACCTTCCGCCGTAGATTTTTGGTGCAACCAAACTCCTCACCCCGAGTCATGCAAATCCCACATGAACTGGTTTAGACCGAACCATCCGTCAGAGTTCAGGAAAATGCTGGTTCACTTGGCACTGGTCCAAGCACAAGACATGCATAAGGAAGCTCAAGAGTATGGCCCAAAATGTGCAACCAAGATGCAGAAATGTGTCTTCCATGACTGTTTGAAGCTCTATGACAATACCATCTTCCATCTAAACCGAACCCTTCATGCCCTACACACAGCTTCTTGCTCCCTATCAGACGCACAAACATGGCTCAGCACTGCCGTCACAAACATCGAAACTTGCCGGAGCGGCGCGTTGCAGCTCAGAGTCGGAGAGTTTACGGCTGAAAATAATGTGAGCGAGAGTGTTAGGAAGATGATAAGCAATGCGTTAGCCGTTAATGGGAAATTTCTGCAGCAAGAGAATAATACAGAAGAAGAAGCATATGGATTTCCCCGTTGGTTTTCTGGTCACGAAAGGAGGCTATTGAGCTCAAAGCGATCGTCGGTGAAGGCACATCTTGTGGTGGCTCAAGATGGTACGGGCCATTTTAAGACAGTGCAAGCCGCCATTGATGCATCATCAAGGAGAAGAGTGAAGACAAGGTTTGTGATCCGTGTGAAGAAAGGGATTTATGAAGAGAATATTGAAGTTGATAAGGATAATGAAAATCTAATGATTATTGGCGATGGATCGAGAGTCACCATTATAACTGGTAGTAGAAGTGTCAAAGATGGGATCACCCCCTCCATGTCCGCAACAGCAGGTATAGATGGTGCCCACTTCATTGCACGAGACATCACTTTTAGAAACACAGCCGGTCCTGAGAAAGGTCAAGTGCTGGCACTCCAATCAGCCTCCGACCTCTCCATCTTCTACCAGTGCTCTATCGAAGGCTATCAAGACACTCTAATGGCTCATGCACAACGTCAATTCTATAGAGATTGCAGCATTTTTGGCACAGTTGATTTCATTTGGGGCGATGCTGCAATTGTTCTGCAAAATTGCACCATTCTTGTGAGAAAGCCCTTACAGGGACAAGGAAACATGATCACGGCTCAAGGGCGAGGTGACCCGTTTCAGAACACCGGAATATCAATAATCAATTCTTGCATTCGAGCCGCGCCGGATCTCAGACCGGTCGTAAAATCATATGAAACCTATTTGGGTGGGCCATGGCAGCAATATGCACGAGTTGTTGCAATGAAAACCTACATTGAAGGATTGGTGAATCCATTGGGTTGGTCTCAATGGGGTGATAGTGATTTTGCTCAGGATACGTGTTATTTTGGGGAATATATGAACTCTGGGACTGGTTCATCAACAAAAGATAGGGTTCAATGGCCTCGGTTTCATGTCTTGACGAGCGAGAATGATACACAACAGTTTTCTGTTGCTGGACTTCTTGCTGGTAACACTTGGTTGCCTCCAACCGGTGTGCCTTTTGATATTGACATTTAA 1584 0.452 MASITFKLLFTLTLFSSLFSISSSSSSSSLPSAVDFWCNQTPHPESCKSHMNWFRPNHPSEFRKMLVHLALVQAQDMHKEAQEYGPKCATKMQKCVFHDCLKLYDNTIFHLNRTLHALHTASCSLSDAQTWLSTAVTNIETCRSGALQLRVGEFTAENNVSESVRKMISNALAVNGKFLQQENNTEEEAYGFPRWFSGHERRLLSSKRSSVKAHLVVAQDGTGHFKTVQAAIDASSRRRVKTRFVIRVKKGIYEENIEVDKDNENLMIIGDGSRVTIITGSRSVKDGITPSMSATAGIDGAHFIARDITFRNTAGPEKGQVLALQSASDLSIFYQCSIEGYQDTLMAHAQRQFYRDCSIFGTVDFIWGDAAIVLQNCTILVRKPLQGQGNMITAQGRGDPFQNTGISIINSCIRAAPDLRPVVKSYETYLGGPWQQYARVVAMKTYIEGLVNPLGWSQWGDSDFAQDTCYFGEYMNSGTGSSTKDRVQWPRFHVLTSENDTQQFSVAGLLAGNTWLPPTGVPFDIDI 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5068g00004 527 SMART PMEI_2 29 174 IPR006501 GO:0004857
Pral5068g00004 527 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 178 IPR035513 -
Pral5068g00004 527 Gene3D - 211 527 IPR012334 -
Pral5068g00004 527 FunFam Pectinesterase 208 527 - -
Pral5068g00004 527 CDD PMEI-like_3 37 178 - -
Pral5068g00004 527 NCBIfam pectinesterase inhibitor domain 9 176 IPR006501 GO:0004857
Pral5068g00004 527 Pfam Pectinesterase 215 512 IPR000070 GO:0030599|GO:0042545
Pral5068g00004 527 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 178 IPR035513 -
Pral5068g00004 527 PANTHER PECTINESTERASE 18 517 - -
Pral5068g00004 527 Pfam Plant invertase/pectin methylesterase inhibitor 33 173 IPR006501 GO:0004857
Pral5068g00004 527 SUPERFAMILY Pectin lyase-like 211 525 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5068g00004 Pral-Chr5068 217755 223446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5068g00004 37 523 Carbohydrate Esterase AT5G51490 54.000 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5068g00004 K01051 - gmx:100807908 629.787