Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5064g00001 ATGGATCAGGGCTTTCTGGGCATCCTCAAACTTCGTATTAAAAAAGGAATCAACCTTGCAGTACGTGACAGTCGTGCAAGTGATCCTTACGTTGTTATTACCATGCACGAACAGAAACTGAGGACTAGGGTTGTTGAAGATGACTGCAATCCTGAGTGGAATGATGAACTGACGTTGTATGTGAAAAGAATTGATGCTCCAATCATTATAACAGTGTTGGACAAAGACACGTTCACGGAGGACGACCCAATGGGGGAGGTAGAGTTAGACATAAAGCCATTGTTGGAGAGTGTGAAGATGACCATGAACACGACCGAAGATCTTGAAGAAGGCTGTGTGGTCAAGGCAGTTCAACCCAGCAGAAATAACTGCCTGTCTGAAGAGAGCTTGTGCAAATGGATCGACGGAAGATTCCGCCAAGAAATGTTTCTCAGATTGAACAAGGTTGAGCGAGGTGAATTACTCGTAGAAATTGAGTGGAATGATCAAGGTTGCCTGGGATTATCAAACGTTGACCTTTAA 522 0.4406 MDQGFLGILKLRIKKGINLAVRDSRASDPYVVITMHEQKLRTRVVEDDCNPEWNDELTLYVKRIDAPIIITVLDKDTFTEDDPMGEVELDIKPLLESVKMTMNTTEDLEEGCVVKAVQPSRNNCLSEESLCKWIDGRFRQEMFLRLNKVERGELLVEIEWNDQGCLGLSNVDL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5064g00001 173 Pfam C2 domain 7 98 IPR000008 -
Pral5064g00001 173 Gene3D C2 domain 6 165 IPR035892 -
Pral5064g00001 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 6 162 IPR044562 -
Pral5064g00001 173 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Pral5064g00001 173 SMART C2_3c 8 103 IPR000008 -
Pral5064g00001 173 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 115 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5064g00001 Pral-Chr5064 574 1926 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5064g00001 39 169 C2H2 Transcription Factor Family AT1G70790 47.727 1.87e-40 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5064g00001 - - pcin:129322620 306.219