Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5062g00020 ATGGCGTCTGGCGGTGGAAACGCAGGGGTAGAGTGGCACGTTAGGCCTCCTAACCCTAAGAACCCCGTCGTGTTCTTCGATATCACCATCGGTAACATCCCGGCTGGTAGAATCAAGATGGAGCTCTTCGCCGATATTGCCCCCAAAACTGCTGAGAATTTCAGGCAGTTCTGCACTGGCGAGTACAGGAAAGCCGGTCTTCCTGTTGGTTATAAAGGCTGTCAATTTCATAGGGTGATTAAGGATTTTATGATACAAGCTGGTGACTTCGTGAAGGGTGATGGGAGTGGATGTGTTTCCATCTATGGACACAAGTTTGATGATGAAAATTTTATTGCTAAACATACTGGCCCAGGCCTTCTATCAATGGCAAATAGTGGACAGAATACCAATGGTTGCCAGTTTTTTATAACATGTGCAAAATGTGACTGGCTGGACAACAAGCATGTCGTTTTTGGGAGGGTGCTTGGAGACGGCCTTTTGGTTGTCAGGAAGATTGAAAATGTGGCCACTGGACCCAATAACCGGCCTAAATTAGCTTGCGTCATTGCTGAGTGTGGAGAAATGTAA 570 0.4667 MASGGGNAGVEWHVRPPNPKNPVVFFDITIGNIPAGRIKMELFADIAPKTAENFRQFCTGEYRKAGLPVGYKGCQFHRVIKDFMIQAGDFVKGDGSGCVSIYGHKFDDENFIAKHTGPGLLSMANSGQNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5062g00020 189 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 25 188 IPR002130 GO:0000413|GO:0003755
Pral5062g00020 189 SUPERFAMILY Cyclophilin-like 12 189 IPR029000 -
Pral5062g00020 189 CDD cyclophilin_ABH_like 22 187 - -
Pral5062g00020 189 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 26 187 IPR002130 GO:0000413|GO:0003755
Pral5062g00020 189 FunFam Peptidyl-prolyl cis-trans isomerase 11 189 - -
Pral5062g00020 189 PIRSF Peptidylpro_ismrse 12 189 IPR024936 GO:0003755
Pral5062g00020 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 88 IPR002130 GO:0000413|GO:0003755
Pral5062g00020 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 162 IPR002130 GO:0000413|GO:0003755
Pral5062g00020 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 57 IPR002130 GO:0000413|GO:0003755
Pral5062g00020 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Pral5062g00020 189 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 146 IPR002130 GO:0000413|GO:0003755
Pral5062g00020 189 Gene3D - 11 189 IPR029000 -
Pral5062g00020 189 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 24 189 - -
Pral5062g00020 189 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 71 88 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5062g00020 Pral-Chr5062 105235 108896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5062g00020 36 187 U-box Gene Family AT5G67530 43.137 7.16e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5062g00020 K09567 - zju:107428673 392.119