Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5062g00019 ATGGCTGATGCCAGTCCTAGGACTGATATTTCTACGGATGTTGATACTGATGATAAAAATCAGCAGTATGATAGAAATCAATCCCTTGTTGCTGTGGCTTCTGATTCTAGTGACAGATCAAAGGATAAATCAGATCAGAAGACTCTCCGCAGGCTTGCTCAGAATCGTGAGGCAGCAAGAAAAAGCCGATTGAGAAAGAAAGCCTATGTCCAACAACTGGAAAGCAGTCGTTTGAAGTTGACCCAACTAGAGCAAGAGCTTCAACGAGCTAGGCAGCAGGGAATCTTTATATCAAGCTCAAGCGATCAAACAAATGCAATGAGTGGAAATGGAGCCATGGCATTTGATGTAGAATATGCAAGGTGGTTAGAAGAGCAGAATCGCCAAATTAATGAGCTAAGAGCAGCTGTAAATTCTCATGCTGGTGATACAGAACTTCGCATGATTGTTGATAACATATTGGCCCACTATGATGAGATTTTTAGGCTGAAAGGTATTGCAGCTAAGGCTGACGTTTTCCATTTGTTGTCCGGCATGTGGAAAACACCTGCAGAGAGATGTTTTTTATGGCTTGGTGGCTTTCGATCGTCTGAGCTCCTCAAGCTTCTGATAACTCAATTGGAACCTCTCACGGAGCAGCAGCTGGTTGGCATTACCAACCTGCAGCAATCCTCTCAACAAGCAGAAGATGCATTATCTCAGGGTATGGAAGCTTTGCAACAATCCCTGGCTGAGACATTATCTAGTGGGTCTCTCGGATCTTCTGGTTCATCTGGGAATGTGGCAAATTACATGGGCCAAATGGCTATGGCCATGGGCTGA 822 0.444 MADASPRTDISTDVDTDDKNQQYDRNQSLVAVASDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSSDQTNAMSGNGAMAFDVEYARWLEEQNRQINELRAAVNSHAGDTELRMIVDNILAHYDEIFRLKGIAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLITQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLAETLSSGSLGSSGSSGNVANYMGQMAMAMG 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5062g00019 273 ProSiteProfiles DOG1 domain profile. 112 273 IPR025422 GO:0006351|GO:0043565
Pral5062g00019 273 FunFam BZIP family transcription factor 46 95 - -
Pral5062g00019 273 MobiDBLite consensus disorder prediction 1 49 - -
Pral5062g00019 273 Pfam Basic region leucine zipper 43 89 IPR004827 GO:0003700|GO:0006355
Pral5062g00019 273 SUPERFAMILY Leucine zipper domain 47 90 IPR046347 GO:0003700|GO:0006355
Pral5062g00019 273 SMART brlzneu 43 106 IPR004827 GO:0003700|GO:0006355
Pral5062g00019 273 PANTHER TRANSCRIPTION FACTOR TGA9 12 273 - -
Pral5062g00019 273 Coils Coil 123 143 - -
Pral5062g00019 273 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 45 89 IPR004827 GO:0003700|GO:0006355
Pral5062g00019 273 Coils Coil 66 93 - -
Pral5062g00019 273 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 50 65 IPR004827 GO:0003700|GO:0006355
Pral5062g00019 273 Gene3D - 46 99 - -
Pral5062g00019 273 Pfam Seed dormancy control 129 204 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5062g00019 Pral-Chr5062 99549 103643 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5062g00019 1 273 bZIP Transcription Factor Family AT3G12250 76.923 2.31e-146 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral5062g00019 DOG1 1.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5062g00019 K14431 - zju:107428714 464.922