Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5062g00018 ATGGCTGATGCCAGTCCTAGGACTGATATTTCTACGGATGTTGATACTGATGATAAAAATCAGCAGTATGATAGAAATCAATCCCTTGTTGCTGTGGCTTCTGATTCTAGTGACAGATCAAAGGATAAATCAGATCAGAAGACTCTCCGCAGGCTTGCTCAGAATCGTGAGGCAGCAAGAAAAAGCCGATTGAGAAAGAAAGCCTATGTCCAACAACTGGAAAGCAGTCGTTTGAAGTTGACCCAACTAGAGCAAGAGCTTCAACGAGCTAGGCAGCAGGGAATCTTTATATCAAGCTCAAGCGATCAAACAAATGCAATGAGTGGAAATGGAGCCATGGCATTTGATGTAGAATATGCAAGGTGGTTAGAAGAGCAGAATCGCCAAATTAATGAGCTAAGAGCAGCTGTAAATTCTCATGCTGGTGATACAGAACTTCGCATGATTGTTGATAACATATTGGCCCACTATGATGAGATTTTTAGGCTGAAAGGTATTGCAGCTAAGGCTGACGTTTTCCATTTGTTGTCCGGCATGTGGAAAACACCTGCAGAGAGATGTTTTTTATGGCTTGGTGGCTTTCGATCGTCTGAGCTCCTCAAGCTTCTGATAACTCAATTGGAACCTCTCACGGAGCAGCAGCTGGTTGGCATTACCAACCTGCAGCAATCCTCTCAACAAGCAGAAGATGCATTATCTCAGGGTATGGAAGCTTTGCAACAATCCCTGGCTGAGACATTATCTAGTGGGTCTCTCGGATCTTCTGGTTCATCTGGGAATGTGGCAAATTACATGGGCCAAATGGCTATGGCCATGGGTAAGCTTGGCACACTTGAGGGTTTTATTCGACAGGCTGACAATTTGAGGCAGCAAACACTACAACAAATGCACCGTATATTGACAACTCGCCAGTCGGCTCGGGCCCTTCTGGCTATACATGACTACTTCTCTCGACTTCGTGCTCTTAGTTCCCTCTGGCTGGCTCGCCCAAGAGATTGA 999 0.4535 MADASPRTDISTDVDTDDKNQQYDRNQSLVAVASDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSSDQTNAMSGNGAMAFDVEYARWLEEQNRQINELRAAVNSHAGDTELRMIVDNILAHYDEIFRLKGIAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLITQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLAETLSSGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5062g00018 332 ProSiteProfiles DOG1 domain profile. 112 329 IPR025422 GO:0006351|GO:0043565
Pral5062g00018 332 MobiDBLite consensus disorder prediction 1 49 - -
Pral5062g00018 332 Pfam Seed dormancy control 129 204 IPR025422 GO:0006351|GO:0043565
Pral5062g00018 332 SMART brlzneu 43 106 IPR004827 GO:0003700|GO:0006355
Pral5062g00018 332 PANTHER TRANSCRIPTION FACTOR TGA9 12 331 - -
Pral5062g00018 332 Coils Coil 123 143 - -
Pral5062g00018 332 SUPERFAMILY Leucine zipper domain 47 90 IPR046347 GO:0003700|GO:0006355
Pral5062g00018 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 45 89 IPR004827 GO:0003700|GO:0006355
Pral5062g00018 332 Coils Coil 66 93 - -
Pral5062g00018 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 50 65 IPR004827 GO:0003700|GO:0006355
Pral5062g00018 332 Pfam Basic region leucine zipper 43 89 IPR004827 GO:0003700|GO:0006355
Pral5062g00018 332 FunFam BZIP family transcription factor 46 95 - -
Pral5062g00018 332 Gene3D - 46 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5062g00018 Pral-Chr5062 99549 104013 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5062g00018 1 332 bZIP Transcription Factor Family AT3G12250 79.217 0.0 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral5062g00018 DOG1 1.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5062g00018 K14431 - zju:107428714 570.466