Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5061g00005 ATGGAAGACAAACAGCCACCACAATCCGCCCTTGTTCATGACCCTCCTCCTCCTCCTCCTCCGTCTATCCCCAGTCATCATGATCATATTGATCCCGTCAAAGAAGAATCCCCCAGAAAACCCGTCACCGGCGGCGGCGCCGGTGGAGATAGGTTGAAGAGAGATGAGTGGAGTGAAGGAGCTGTGTCGACGCTTTTGGAGGCGTACGAAGCCAAATGGGTGCTCCGGAACAGAGCCAAGCTCAAGGGCCATGATTGGGAGGACGTCGCCAGGTACGTGTCTTCACGCGCCAACTGTACCAAGTCTGCTAAGACTCAGACTCAGTGCAAGAACAAGATCGAGTCGATGAAGAAACGGTACCGTTCCGAGTCGGCGTCCGGGGATGCATCATCGTCTTGGCCTCTGTATTCGCGTCTTGATCTTCTCCTCCGTGGGACTGGGCCTACTGCGTCCACCACGACGATGGCTGTGCCGCTTGCCGCGGCCGCGGCGGCACCGTCTCAGGTGACTCACCACGGCAATAACCAGGGTTTTGTGTTGTTGGAGCCTCCGTTGGCGGTGGCTCAGCTACCTCATCAACTACAGCCGCCTCCGGTGGCCGTCGCCGCTCCTCCTCCGATTGCCAACGCTCAAAACTCTCACGGATCCAACGGTATTGACAGGTTAGCCAAGGAAGATGGATTAGGGACGAACAAATCATCAGATCAAGTGTCCAACAAGAACATGAATGCAACTCTGGACACAGATAGCAGCACACCAGCCCTGTATAGCCATTCAAAGGATCACCCAACAAGAAGTAACAACAACAACAACAAGCGGAAGAAGAAGATGGATCATCGAAGCAACATGAAGAAGATGAAGAGAAAGAGCGCAGAAGGGAAGTTTAATGAGATGGGAATAGCAGAGAGCATAAGGTGGCTTGCAGAGGTAGTGGTGAGATCAGAGCAGGCGAGGATGGAGATGATGAAGGAGATCGAGAAGATGAGGGTTGAAGCAGAGGCCAAGAGAGGAGAAATGGATCTTAAAAGAACTGAGATCATTGCTAATACCCAGCTAGAGATTGCTAGGATCTTTGCAAGTGTCAATAATAATAAAGGTGTTGATTCCTCACTAAGAATTGGTAGGAGTTAA 1131 0.5181 MEDKQPPQSALVHDPPPPPPPSIPSHHDHIDPVKEESPRKPVTGGGAGGDRLKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARYVSSRANCTKSAKTQTQCKNKIESMKKRYRSESASGDASSSWPLYSRLDLLLRGTGPTASTTTMAVPLAAAAAAPSQVTHHGNNQGFVLLEPPLAVAQLPHQLQPPPVAVAAPPPIANAQNSHGSNGIDRLAKEDGLGTNKSSDQVSNKNMNATLDTDSSTPALYSHSKDHPTRSNNNNNKRKKKMDHRSNMKKMKRKSAEGKFNEMGIAESIRWLAEVVVRSEQARMEMMKEIEKMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNNNKGVDSSLRIGRS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5061g00005 376 Gene3D - 57 122 - -
Pral5061g00005 376 FunFam Trihelix transcription factor ASIL2 57 122 - -
Pral5061g00005 376 Coils Coil 318 338 - -
Pral5061g00005 376 MobiDBLite consensus disorder prediction 269 287 - -
Pral5061g00005 376 MobiDBLite consensus disorder prediction 196 292 - -
Pral5061g00005 376 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 25 361 IPR044823 -
Pral5061g00005 376 Coils Coil 269 289 - -
Pral5061g00005 376 Pfam Myb/SANT-like DNA-binding domain 54 141 IPR044822 -
Pral5061g00005 376 MobiDBLite consensus disorder prediction 10 26 - -
Pral5061g00005 376 MobiDBLite consensus disorder prediction 229 264 - -
Pral5061g00005 376 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5061g00005 Pral-Chr5061 48756 51794 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5061g00005 40 209 Trihelix Transcription Factor Family AT3G14180 32.571 1.06e-17 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral5061g00005 Myb_DNA-bind_4 2.8e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5061g00005 - - gmx:100799917 375.17