Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5061g00004 ATGGAGACTAAGCGTCGAAAGGTTCGCTCCTTTGTGGGCAGGCTGAGCTCTGTTTCAGAGCAGACCCAGCTCGATGCTCTGCGCGAGCTACGCTTGATGACCAAGGAGGACGAAGAAACCCGACCCGTCATCGCTGATTCGGGTGCGATTCCGTACTTGGTTGATACCCTCTTTTCGTCTTCCCACGTTTTCCAAGAGAACGCCTCGGCGACGCTTCTCAACATTTCGATTTCCTGTAGAGAGCCTCTCATGTCCACGCGCGGAGTCCTCGACGCTATCTCGCACGTGCTTTCCCGCCATAACTCGACTTCGTCTGCTTGCGCCGTTCAATCCTGCGCCGCCACCTTGTACAGCCTCGTCGTCGTCGATAACTACAGGCCTATTGTTGGTTCCAAGCGTGACATTGTGTATGCTCTCGTGGATATCATCAAAACCCCCAAATCGACGACCCGATCGATCAAGGACGCTCTCAAGGCTTTGTTCGGAATCGCGCTTCATCCGCTTAATCGGTGCACGATGATCCAACTCGGTGCGGTTGAAGCTCTGTTCTCGTTGGTTGCGAAGGACCGGAAGGTCGGGATTGTGGAGGATGCCACGGCGGTGATAGCGCAAATCGCGGGCTGCGAAGAGAGTGTGGAAGCGTTTCGGAAGGTGTCAGGAATCGGAGTGCTGGCTGATCTTCTGGATATGGGGAATAAGGCGAGCATGAAGACGAAGGAGAATGCTGTTTCGGGATTACTGAAGCTAGTGAGATGTGGAGGGGCGAAAGTAGCCATGGATGTGAGATTGAGAGCTTTAGGGGCATTTGATGGAATTGCGGACGTGCAAGAGAATGGCAGCTCCAAAGGGAAGAGCAAGGCGGCGGCGTTATCAGCGGAATTGCTCGGAGATGAAATCCATTTGAGTACACAGAGGGATTCGCGGTTTGATTCCTCAACCAGTCAAGATTCATCATTTTCATTCAATTTTTCAACAGATTCATCAGAATCTGGTGTGTAG 999 0.5255 METKRRKVRSFVGRLSSVSEQTQLDALRELRLMTKEDEETRPVIADSGAIPYLVDTLFSSSHVFQENASATLLNISISCREPLMSTRGVLDAISHVLSRHNSTSSACAVQSCAATLYSLVVVDNYRPIVGSKRDIVYALVDIIKTPKSTTRSIKDALKALFGIALHPLNRCTMIQLGAVEALFSLVAKDRKVGIVEDATAVIAQIAGCEESVEAFRKVSGIGVLADLLDMGNKASMKTKENAVSGLLKLVRCGGAKVAMDVRLRALGAFDGIADVQENGSSKGKSKAAALSAELLGDEIHLSTQRDSRFDSSTSQDSSFSFNFSTDSSESGV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5061g00004 332 SMART arm_5 166 207 IPR000225 GO:0005515
Pral5061g00004 332 SMART arm_5 208 251 IPR000225 GO:0005515
Pral5061g00004 332 SMART arm_5 37 77 IPR000225 GO:0005515
Pral5061g00004 332 MobiDBLite consensus disorder prediction 304 332 - -
Pral5061g00004 332 PANTHER U BOX DOMAIN-CONTAINING 7 295 - -
Pral5061g00004 332 Gene3D - 5 294 IPR011989 -
Pral5061g00004 332 MobiDBLite consensus disorder prediction 306 332 - -
Pral5061g00004 332 Pfam Armadillo/beta-catenin-like repeat 38 76 IPR000225 GO:0005515
Pral5061g00004 332 FunFam ARM repeat superfamily protein 2 298 - -
Pral5061g00004 332 SUPERFAMILY ARM repeat 9 275 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5061g00004 Pral-Chr5061 35736 36859 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5061g00004 7 290 U-box Gene Family AT2G23140 34.035 1.75e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5061g00004 - - pcin:129316132 498.434