Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral505g00013 ATGCAGAAACTATCTGTCCATCGCCGACTGTGTCTCCTGCTTCGACGTCGTTGCCGTTCAAATCCGCAGCTGCACCGCCGCCTTGGCCTCGGCTGCCCTTGCCGTCCTCGATGGTTGCTTCCTCAGGGATACTTTACATATGGTGTGTTGAGGTACAACTCCAATGGTTTCTTTGATGAGACCCCGCAGCCTTTCAACATCGTATCATGTGGGAATCAGACTACAGAAGAAGCAGCAACATTTAACACAACAGTGCGACAAGTTCTAATGAATCTCCAAACAGCAACACCTAGAATCCCTAATTTCTCTGCGGCCACGAAGATTCATGTCCCTAATAATAATTATAATGGCGCCACTATTTATGCTTTTGCTCAGTGTGTCGATACCGCCACAATAAACCAGTGCCTTAATTGCTTGAAGGTTGATTACAGTAGCTTGGAGATTTGTCTTCCAAATTCGGATGGTATGGCTTTTGATTATGGTTGTTTCATGAGATACTCAACCACTGCCTTTTTCCCAGATAACCAGACCATTGATATCATACCCTTGGTCAAACAAGGTTCCAGCAATAAGGGGCCTACTATTGGTGGAGTAGTTGGTGGTATAGCTTTTGTTTTGATACTCCTTGGATTGTTTGCCTCGATTAGACGACCTAAAAAGAATAAGAGAACTCCTAGAGAAGACATAATTGGAGCAAGCAAATTAAAAGGCCCAATTACTTACCGTTCTAGGGATTTGATGTCTGCGACCAACAATTATAGTGAAGAAAATAAACTAGGAGAGGGTGGATTCGGGGTTGTGCACAAGGGAACTTTGAAGAATGGGAAAGTTGTTGCAGTCAAGAAATTGACCTTAAACCACTCCAAGAGAATGGAGGAAGATTTTGAGAGTGAAGTGAAACTTATTAGTAACGTTCATCATCGAAATCTTGTTCGACTCCTGGGATATTGTAGTAAAGGGAATGACAGAATTCTTGTTTATGAATACATGAAAAATAGCAGCCTTGATAGATTCTTGTTTGGTGAAAGGACAGGTTTTCTCAACTGGAAGCAGCGATATGATATAATTTTAGGAGTTGCAAGAGGTTTGGCATATTTGCATGAGGAGTTTCATGTTCGAATTATACATAGAGACATAAAGACTAACAACATCCTCTTAGATGATAATCTACAACCAAAAATTGCAGATTTTGGATTGGCAAGACTCTTACCAAATGACGAATCTCATCTTAACACAAAGATTGTTGGAACATTGGGATATACAGCGCCAGAGTATGCTATTCATGGCCAACTATCAGAAAAAGCTGATATTTATAGTTATGGCGTTGTCGTCTTAGAAATCATCAGTGGTCAGAAGTGTAAAGAATTAAGGCTCCACGGTGATGATGAAGGCGCATTCCTCGTTCAAACAGCGTGGAAGCTTTATGAGAAGGATAAACACTTAGAATTAGTGGATAAGAATTTAGAGCCCAATGACTATTATGCTGAAGAAGTAAAGAAAATCATAGAGATCGGTTTGCTTTGCATTCAAGCATCTGCCAATGCAAGGCCAATGATGTCTGAAGTAGTTGCATTGCTTCAAAACAGGGACTTATTAGAGAACTTGAGACCCACCATGCCTATCTTGATTGAAATTAATTAG 1641 0.4071 MQKLSVHRRLCLLLRRRCRSNPQLHRRLGLGCPCRPRWLLPQGYFTYGVLRYNSNGFFDETPQPFNIVSCGNQTTEEAATFNTTVRQVLMNLQTATPRIPNFSAATKIHVPNNNYNGATIYAFAQCVDTATINQCLNCLKVDYSSLEICLPNSDGMAFDYGCFMRYSTTAFFPDNQTIDIIPLVKQGSSNKGPTIGGVVGGIAFVLILLGLFASIRRPKKNKRTPREDIIGASKLKGPITYRSRDLMSATNNYSEENKLGEGGFGVVHKGTLKNGKVVAVKKLTLNHSKRMEEDFESEVKLISNVHHRNLVRLLGYCSKGNDRILVYEYMKNSSLDRFLFGERTGFLNWKQRYDIILGVARGLAYLHEEFHVRIIHRDIKTNNILLDDNLQPKIADFGLARLLPNDESHLNTKIVGTLGYTAPEYAIHGQLSEKADIYSYGVVVLEIISGQKCKELRLHGDDEGAFLVQTAWKLYEKDKHLELVDKNLEPNDYYAEEVKKIIEIGLLCIQASANARPMMSEVVALLQNRDLLENLRPTMPILIEIN 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral505g00013 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 374 386 IPR008271 GO:0004672|GO:0006468
Pral505g00013 546 Pfam Protein kinase domain 253 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral505g00013 546 CDD TM_EGFR-like 191 223 - -
Pral505g00013 546 ProSiteProfiles Gnk2-homologous domain profile. 63 171 IPR002902 -
Pral505g00013 546 Gene3D Transferase(Phosphotransferase) domain 1 330 535 - -
Pral505g00013 546 FunFam Cysteine-rich receptor-like protein kinase 2 330 534 - -
Pral505g00013 546 Gene3D - 64 171 IPR038408 -
Pral505g00013 546 Pfam Salt stress response/antifungal 70 168 IPR002902 -
Pral505g00013 546 CDD STKc_IRAK 259 528 - -
Pral505g00013 546 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 46 543 - -
Pral505g00013 546 Gene3D Phosphorylase Kinase; domain 1 215 329 - -
Pral505g00013 546 ProSiteProfiles Protein kinase domain profile. 253 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral505g00013 546 SMART serkin_6 253 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral505g00013 546 ProSitePatterns Protein kinases ATP-binding region signature. 259 282 IPR017441 GO:0005524
Pral505g00013 546 SUPERFAMILY Protein kinase-like (PK-like) 235 526 IPR011009 -
Pral505g00013 546 FunFam Cysteine-rich receptor-like protein kinase 2 218 329 - -
Pral505g00013 546 FunFam Cysteine-rich receptor-like protein kinase 2 65 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral505g00013 Pral-Chr505 167402 171536 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral505g00013 32 544 Receptor kinase-like Gene Family AT1G70520 38.015 1.89e-104 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral505g00013 Pkinase 2.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral505g00013 - - gmx:100813585 676.011