LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral505g00010	ATGCTCCAACATTTTAATCACCTTCCCTTATTTATCTTCATATTCTGGTTATGCTGCACTCTTCACGGCGTCGTTTCAGACCCACAAACTCAGCTTCTTAGTGCCCGGTGCAACCCACCTGACTTCTTCCTCGTTTCCGACTCCTCTATCCTCACCGGAAACCTAAACGAAACATTTCGGGATATCAGAGGCCAAATCAGGGACCAGAAGAAGCACTTCGCCACAGCGCAGCATGGCAATGGGGAAAATTTCCCGGTTTATACACTTTTTCAATGCAGAAACTATCTTTCCATCGCTGACTGTGTCGCCTGCTTTGAGATCTCTGCCGCACAGATCCGCAAATGCGCTGCCGCCGCGTCACCCTCTCCAGGTGCCTATGTCGTCTACGACGGCTGCTTCATTAGGATAAACCCAATGGAAATCAGTTTCACTGCTTATTGTGAAAACCCTTTTCGGCTCGACAGGTACAACTATAACACTTTCTTTAACGAGGCAACGCAAACTTTCAATGGCGTATCATGTGGGAATGAGACTACAGGAGGAGCTTCTGCATTTTCTGAAGCAAGGCAACAAGTACTAACCAATCTCCAAATATCAACACCAACAATCCCAAGTTTCTTTGCGGCCACAAAGATTCAAGTTTCAAATAGCGGTTCAACTATCTATGCCTTTGCCCAGTGTGTTAATACTATCACAGCGAATGGGTGTCTGAATTGCTTGAAGGCTGGGTACAGTAATTTGCAGATTTGTCTTCCATTTACCGATGGTAGGGCTTTTGATGCAGGCTGTTTCTTGAGATATTCCAGTTCTTCAAGCAAGAAAGGGGCAACTGTTGGTGGAGTTGTTGGAGGTGTATCTCTTACTTTGATCCTCCTTGCATTATTTGCCTGGATTAAACGACAGAAAAGAGATAAGAATGTTCCTCGAGGAAACCATTTGAAAAGCGACTTAACTGGATTAAGCAAGTTGAAAGGTCCAGTTACATACAGTTATAACGATTTGGTGCTTGCAACAAAAAATTTTAGTGAAGAAAATAAACTAGGAGAAGGAGGATTTGGGGCTGTATACAAGGGCACTTTGAAGAATGGGAAAGTTGTTGCAGTCAAGAAATTGACTTCATCTCGCTCCAAGAGGGTGGAGGAAGAATTTGAAAGTGAGGTGATGCTTATAAACAATGTTCACCATCGGAATCTTGTTCGACTGCTGGGTTGTTGTAGTAAAGGCTACAACAAAATCCTTGTCTATGAATACATGAAAAATAGCAGCCTCGACAGATTCATATTTGGTAAAAAGAAGGGTTCTCTTAGTTGGAAGCAACGATATGACATAATTTTAGGAATAGCAAGAGGTTTGACTTATCTACATGAGGAATTTCATGTGCGTATCATACACAGAGATATCAAGACTAATAACATCCTCTTGGATGATGATCTGCAACCTAAGATTGCTGATTTTGGGTTAGCAAGGTTGCTACCTGAGAACAAATCTCATGTAAGCACAAGACTCGCAGGAACATTAGGATATACAGCGCCGGAATATGCAATTTATGGCCAGTTATCTGAGAAAGCTGATATCTATAGTTATGGTGTTGTAGTTCTGGAGATCATTAGTGGTCAAAAGTGTAGAAAATTAAATGTTGATGATGATGAAGGGGCATCCCTTCTTCAAAAGGCTTGGAATTTATATGAGAAAGGAAGGCATTTAGAGTTGATGGACAAGACCTTAGAACCTAATGTATATGATGCAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACCCAAGCATCCGTTGATACAAGGCCAATGATGTCTGCAGTAGTTGCTTTGCTTCAAAAGAAGGATTTGTCAGAGAACCTTAGGCCCACTATGCCTATCTTGATAGAAATTAATTAG	1902	0.4169	MLQHFNHLPLFIFIFWLCCTLHGVVSDPQTQLLSARCNPPDFFLVSDSSILTGNLNETFRDIRGQIRDQKKHFATAQHGNGENFPVYTLFQCRNYLSIADCVACFEISAAQIRKCAAAASPSPGAYVVYDGCFIRINPMEISFTAYCENPFRLDRYNYNTFFNEATQTFNGVSCGNETTGGASAFSEARQQVLTNLQISTPTIPSFFAATKIQVSNSGSTIYAFAQCVNTITANGCLNCLKAGYSNLQICLPFTDGRAFDAGCFLRYSSSSSKKGATVGGVVGGVSLTLILLALFAWIKRQKRDKNVPRGNHLKSDLTGLSKLKGPVTYSYNDLVLATKNFSEENKLGEGGFGAVYKGTLKNGKVVAVKKLTSSRSKRVEEEFESEVMLINNVHHRNLVRLLGCCSKGYNKILVYEYMKNSSLDRFIFGKKKGSLSWKQRYDIILGIARGLTYLHEEFHVRIIHRDIKTNNILLDDDLQPKIADFGLARLLPENKSHVSTRLAGTLGYTAPEYAIYGQLSEKADIYSYGVVVLEIISGQKCRKLNVDDDEGASLLQKAWNLYEKGRHLELMDKTLEPNVYDAEEVKKIIEIGLLCTQASVDTRPMMSAVVALLQKKDLSENLRPTMPILIEIN	633

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral505g00010	633	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	462	474	IPR008271	GO:0004672\|GO:0006468
	Pral505g00010	633	Gene3D	-	30	138	IPR038408	-
	Pral505g00010	633	Gene3D	-	166	271	IPR038408	-
	Pral505g00010	633	SUPERFAMILY	Protein kinase-like (PK-like)	321	614	IPR011009	-
	Pral505g00010	633	ProSiteProfiles	Protein kinase domain profile.	341	633	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral505g00010	633	Gene3D	Transferase(Phosphotransferase) domain 1	418	624	-	-
	Pral505g00010	633	SMART	serkin_6	341	594	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral505g00010	633	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3	87	627	-	-
	Pral505g00010	633	Pfam	Protein tyrosine and serine/threonine kinase	344	612	IPR001245	GO:0004672\|GO:0006468
	Pral505g00010	633	Gene3D	Phosphorylase Kinase; domain 1	314	417	-	-
	Pral505g00010	633	CDD	STKc_IRAK	347	615	-	-
	Pral505g00010	633	ProSiteProfiles	Gnk2-homologous domain profile.	167	272	IPR002902	-
	Pral505g00010	633	ProSitePatterns	Protein kinases ATP-binding region signature.	347	370	IPR017441	GO:0005524
	Pral505g00010	633	Pfam	Salt stress response/antifungal	178	269	IPR002902	-
	Pral505g00010	633	Pfam	Salt stress response/antifungal	53	136	IPR002902	-
	Pral505g00010	633	ProSiteProfiles	Gnk2-homologous domain profile.	30	141	IPR002902	-
	Pral505g00010	633	FunFam	Cysteine-rich receptor-like protein kinase 2	418	621	-	-
	Pral505g00010	633	FunFam	Cysteine-rich receptor-like protein kinase 2	169	272	-	-
	Pral505g00010	633	FunFam	Cysteine-rich receptor-like protein kinase 2	303	417	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral505g00010	Pral-Chr505	156776	161910	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral505g00010	8	631	Receptor kinase-like Gene Family	AT1G70520	36.012	2.26e-116	360

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Pral505g00010		Pkinase	4.7e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral505g00010	-		-	pcin:129300003	719.924