Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral505g00009 ATGTTGCTTCACCTGCAACAGAAACCCCACTTTGTCTTCTTCTTGAGTTTGATAATCTGGTCATGGTGGAGCTTTGACGGCGTCGTTTCGGAACCACAGACCAACTTTGTGAAACTAGGGTGTAGCCAGTACAACGTTAGTGAGTTGTCCATCTTCAGTGATAACTTGAACATAACACTGAGAGACCTAAGAGCTCAGATCAGCAACCAGAGCAAGCACTTCGCGACGGCGCAGGCCGTGAAGGGTAACAATCCGGCGTATGGCCTTTTTCAGTGCAGAAACTACCTCTCCATCAAAGATTGCCTTGCTTGTTTTGACTTCGCGAAGGTTCATATACGCAACTGTTCCGTCGCCGCCACCGGTGCTCGTATCATCTACGAAGGTTGCTTCCTCAGGTACGAGAGCAGTGGATTCTTCGATCAGAACACAGACGCTGGGAACAACATAATCTGCGGGAATCAGACGATCAGAAACACCACAGGACTTTCTTCAACTGTGCAACAAGTTCTAACGAATCTGGACATAGCAACCCCAAGAATCAGTGGTTTTTATGCAGCCACTAAGACGCCTGTGCCTAACAGTAATGGCTCAAGCATTTATGCCATTGCTCAATGTATTGAGACTCTCCCACAAGTTGGCTGCCAGGATTGCCTCAACATTGCCTTGAGAAATTTCCAGATCTGTCTTCCCAATTCAAATGCTAAGACTTATGATGCTGGTTGTTTCATGAGATACTCCACCACGGCCTTCTTTGCAGATAATCAAACCATTAACATTAATCCCTTCCTGAAAGAAGGGGGAGCTTCAACGAAGAAGAAGGCCATTATTGGGGGAGTGGTTGGAGGTGGATCTTTTCTTTTGATCCTCCTTGCATTATTTGCTTTGTACAGACGATCAACGTCGTCCAAGAGGATTCATAGAGGTGATATTTTAGGAGCAACTGAGTTGAAAGGCCCAATTAATTATAGGTACAGCGATCTTAAGAAGGCCACAAAGAATTTCAGTAAAGAAAATAAACTAGGAGAAGGAGGCTTCGGTGATGTGTACAAGGGCACTCTAAAAAATGGGAAGGTAGTTGCTGTCAAGAAATTGGCTTTAGGGCAATCCAAACAGATGGAGAAAGATTTTGAGAGTGAAGTAAAGTTGATAAGTAACGTCCATCATCGGAATCTTGTCCGACTTCTTGGATGTTGCACTAAAGGACAAGAGAGGCTGCTTGTTTATGAATACATGAGAAACAACAATGTTGGCACATTCTTGTTTGGAGAAAATAAAGGCTCCCTCAACTGGAAGCAACGTTATAATGTAATTTTAGGCACAGCAAGAGGTTTGGCCTATTTACATGAGGAATTCCATGTATGTATCATACATAGGGATATAAAGAGTAGTAACATTCTTTTGGATGATGATTTTCAACCAAAAATTGCTGACTTTGGGTTAGCTAGGCTTCTCCCGCATGACTTATCTCATCTCAACACGAAATTTGCAGGAACAATGGGATATACAGCACCTGAATATGCAATGCATGGACAACTATCAGAGAAGGCCGATACCTATAGTTTCGGTGTTGTAGTCCTAGAAATCATAAGTGGACACAAGAGCGGTGAATCAAAGGATGAGAGCGAAGGAGAATTCCTCCTTCAAAGAGCTTGGAAACTCTATGATAGAGGCATGCACATTGAGTTTGTGGACAAAACCCTAGACCCTAATGAGTATGATCCAGAAGAAATGAAGAAAATCATAGAGATTGCTTTGCTTTGCACTCAAGCATCTCCTGCAGCGAGGCCAACAATGTCTGAAATTGTAATTATGCTCAAAGGCAAAGGATTAATGGAGAACAGAAGACCCACTATGCCAGTCTATGTGGATCCTAATTTTAATCCCAGAAGGGACTCTTCAACCTCTAACAATTCATCCTCATCAAATGCTACTGCCTCCACTATTGTTCTATCTGGAAGGTGA 1962 0.4302 MLLHLQQKPHFVFFLSLIIWSWWSFDGVVSEPQTNFVKLGCSQYNVSELSIFSDNLNITLRDLRAQISNQSKHFATAQAVKGNNPAYGLFQCRNYLSIKDCLACFDFAKVHIRNCSVAATGARIIYEGCFLRYESSGFFDQNTDAGNNIICGNQTIRNTTGLSSTVQQVLTNLDIATPRISGFYAATKTPVPNSNGSSIYAIAQCIETLPQVGCQDCLNIALRNFQICLPNSNAKTYDAGCFMRYSTTAFFADNQTININPFLKEGGASTKKKAIIGGVVGGGSFLLILLALFALYRRSTSSKRIHRGDILGATELKGPINYRYSDLKKATKNFSKENKLGEGGFGDVYKGTLKNGKVVAVKKLALGQSKQMEKDFESEVKLISNVHHRNLVRLLGCCTKGQERLLVYEYMRNNNVGTFLFGENKGSLNWKQRYNVILGTARGLAYLHEEFHVCIIHRDIKSSNILLDDDFQPKIADFGLARLLPHDLSHLNTKFAGTMGYTAPEYAMHGQLSEKADTYSFGVVVLEIISGHKSGESKDESEGEFLLQRAWKLYDRGMHIEFVDKTLDPNEYDPEEMKKIIEIALLCTQASPAARPTMSEIVIMLKGKGLMENRRPTMPVYVDPNFNPRRDSSTSNNSSSSNATASTIVLSGR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral505g00009 653 FunFam Cysteine-rich receptor-like protein kinase 2 146 250 - -
Pral505g00009 653 ProSiteProfiles Gnk2-homologous domain profile. 34 138 IPR002902 -
Pral505g00009 653 FunFam Cysteine-rich receptor-like protein kinase 2 411 613 - -
Pral505g00009 653 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 88 639 - -
Pral505g00009 653 ProSitePatterns Protein kinases ATP-binding region signature. 340 363 IPR017441 GO:0005524
Pral505g00009 653 MobiDBLite consensus disorder prediction 619 653 - -
Pral505g00009 653 CDD STKc_IRAK 340 607 - -
Pral505g00009 653 Pfam Protein tyrosine and serine/threonine kinase 336 603 IPR001245 GO:0004672|GO:0006468
Pral505g00009 653 MobiDBLite consensus disorder prediction 627 653 - -
Pral505g00009 653 Gene3D Transferase(Phosphotransferase) domain 1 411 617 - -
Pral505g00009 653 ProSiteProfiles Gnk2-homologous domain profile. 144 250 IPR002902 -
Pral505g00009 653 SUPERFAMILY Protein kinase-like (PK-like) 319 630 IPR011009 -
Pral505g00009 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Pral505g00009 653 Gene3D Phosphorylase Kinase; domain 1 298 410 - -
Pral505g00009 653 SMART serkin_6 334 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral505g00009 653 FunFam Cysteine-rich receptor-like protein kinase 2 33 138 - -
Pral505g00009 653 ProSiteProfiles Protein kinase domain profile. 334 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral505g00009 653 Pfam Salt stress response/antifungal 157 247 IPR002902 -
Pral505g00009 653 Pfam Salt stress response/antifungal 44 135 IPR002902 -
Pral505g00009 653 Gene3D - 33 138 IPR038408 -
Pral505g00009 653 Gene3D - 146 250 IPR038408 -
Pral505g00009 653 FunFam Cysteine-rich receptor-like protein kinase 2 300 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral505g00009 Pral-Chr505 102775 107689 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral505g00009 12 653 Receptor kinase-like Gene Family AT1G70520 36.850 1.46e-128 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral505g00009 PK_Tyr_Ser-Thr 3.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral505g00009 - - gmx:100813585 890.952