Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral505g00006 ATGCTCACGCTTCAACCTGTTACTCTCTTTCTTCTCTTATTTACTACCTTCATATCCTGCAACGGCGTCGTTTCCGACCCCCAGACCAATCTTCTCAACTCTGGCTGCTTCCAGTACAACAGATTCGATCCTATAGATGCTAATTCCTTCAATCAAAGCCTAAACGCAGCGTTTGGAGATCTCAGAGATCAGATCGCTAACCAGAGCAAACACGTCGCCAAGGCGCAGCAAGCCAGCGGAGCCACCCCCGTTTTCGCTCTTTTTCAGTGCAGGAGCTATCTCTCCGTCGCCGACTGTGTCGCCTGCTTCACCGTCGCTGTCGCTCAAATCCGCAACTGCTCGGCCAACGCTGCTCGTGTCATCTACGACGGCTGCTTCCTCAGGTATGAGAGCAGCAATTTCTTTGAGCAAGCAACAGGGTCTTTCAATTCTGCATCATGTGGAAATCAGACTCCAGAAGTAGCCACAACAACATTTAACTCAATTATTCGACAAGTGCTAATGAATCTTCAAACAGAAACACCCAGAATCACTGGTTTCTCTGCAGCCACAAAGACGCCAGAAGTGCCTGACAATAATAATATCAACACAACCATTTATGCCTATGCACAATGTACTGAAACTATCTCACAGAGTGGCTGCGAGGGTTGCTTGAAGCAAGGCTACGACACTATGCAGACTTGCCTTCCCAATTCAGATGGGAGGGCTTTTGATGCCGGCTGTTTCATCAGATACTCCACCACTTCCTTCTTTCCTGATAACCTCACCATTATTAATACCACACCCTTATCCAAACAAGGTTCCAGAAGCAACAAAGCGGCCATTATTGGTGGAGTTGCTGGTGGAGGTGTGGCTCTTTTTTTGGTTCTTCTTTCATTATTTGCCTGGATGCAGCGTGTTAGACGGTCAGAAAAGATTGAAAGGGTTCCTAGAGGTAGCAACAAAGGTTCTCTCAGTTGGAAGCAACGATATGATATAATCTTAGGCATAGCAAGGGGTTTGACCTATCTACATGAGGAATTCCATATTTGCATTATACATAGAGATATAAAGACTAACAACATTCTCCTTGATGATGATTTTCAACCTAAAATTGCTGATTTTGGGTTGGCAAGACTTTTACCTCAGGATCAAACTCATCTTAGCACTAGATTTGCCGGAACACTGGGATACACAGCACCTGAATATACAATTCATGGCCAGTTATCAGAGAAAGCTGATACTTACAGTTATGGTATTATAGTCTTAGAAATCATTAGTGGCCAGAAGAACAGTGAACTAAAGATTGATGATCATGCTGATGGCGAATTCCTCCTTCAACAAGCTTGGAAACTATACGAGAAAGGCATGCACTTAGAGTTGGTGGACAATACCTTAAACCCTAACGAGTATGATACAGAAGAAGTGAAGAAAATCATCGAGATTAGTTTGCTTTGCACGCAAGCATCTCCTGCAGTAAGGCCAACAATGTCCGAGGTTGTTGTTTTGCTCCAAAGTAAAGGCTTGTCAAAGAATAAAATCAGACCTACCATGCCTTTCTTTGTTGAAACCGATTCAGGGTTCAAGGCAGACACTTCTAGCTATACTGCTTCCTCAAAATCTAACGCTACTATCTCTACTTCCACCATGATATCAGCAAGATCATGA 1647 0.439 MLTLQPVTLFLLLFTTFISCNGVVSDPQTNLLNSGCFQYNRFDPIDANSFNQSLNAAFGDLRDQIANQSKHVAKAQQASGATPVFALFQCRSYLSVADCVACFTVAVAQIRNCSANAARVIYDGCFLRYESSNFFEQATGSFNSASCGNQTPEVATTTFNSIIRQVLMNLQTETPRITGFSAATKTPEVPDNNNINTTIYAYAQCTETISQSGCEGCLKQGYDTMQTCLPNSDGRAFDAGCFIRYSTTSFFPDNLTIINTTPLSKQGSRSNKAAIIGGVAGGGVALFLVLLSLFAWMQRVRRSEKIERVPRGSNKGSLSWKQRYDIILGIARGLTYLHEEFHICIIHRDIKTNNILLDDDFQPKIADFGLARLLPQDQTHLSTRFAGTLGYTAPEYTIHGQLSEKADTYSYGIIVLEIISGQKNSELKIDDHADGEFLLQQAWKLYEKGMHLELVDNTLNPNEYDTEEVKKIIEISLLCTQASPAVRPTMSEVVVLLQSKGLSKNKIRPTMPFFVETDSGFKADTSSYTASSKSNATISTSTMISARS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral505g00006 548 ProSiteProfiles Gnk2-homologous domain profile. 32 134 IPR002902 -
Pral505g00006 548 Gene3D Transferase(Phosphotransferase) domain 1 298 510 - -
Pral505g00006 548 Gene3D - 30 134 IPR038408 -
Pral505g00006 548 Gene3D - 140 250 IPR038408 -
Pral505g00006 548 ProSiteProfiles Protein kinase domain profile. 148 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral505g00006 548 SMART serkin_6 270 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral505g00006 548 FunFam Cysteine-rich receptor-like protein kinase 2 305 505 - -
Pral505g00006 548 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 86 282 - -
Pral505g00006 548 SUPERFAMILY Protein kinase-like (PK-like) 315 497 IPR011009 -
Pral505g00006 548 Pfam Protein kinase domain 314 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral505g00006 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 345 357 IPR008271 GO:0004672|GO:0006468
Pral505g00006 548 Pfam Salt stress response/antifungal 154 247 IPR002902 -
Pral505g00006 548 Pfam Salt stress response/antifungal 47 131 IPR002902 -
Pral505g00006 548 ProSiteProfiles Gnk2-homologous domain profile. 141 250 IPR002902 -
Pral505g00006 548 FunFam Cysteine-rich receptor-like protein kinase 2 142 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral505g00006 Pral-Chr505 50657 56095 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral505g00006 55 542 Receptor kinase-like Gene Family AT1G70520 30.561 2.10e-61 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral505g00006 Pkinase 3.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral505g00006 - - sita:101785519 453.751