Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5058g00003 ATGGCTGAGCAACCACCATTTTCCTCTTCCTTCTCTCATGGGTGGCCTTATGATGTCTTTCTCAATTTTAGAGGTGAAGATACTCGCTTTGATTTTGCCAGAAACCTCTACGAGGCCTTGCAACAAAAGGGTATCCGTACTTTTTTAGACAACGAAAGGCTTAGAAAAGGAGAAAAGATTACACCGTCACTTCTCAAAGCAATCCAGGAGTCTAGAATGGCTATCTCTATTTTCTCTAGAAACTATGCTTCCTCTACATTTTGTTTAGATGAGCTTGTTCAGATCCTTGAGCATATAAATAAAAAAGGTAGATTGGTTCTGCCCATTTTTTATAACGTGGATCCATCAGAAGTACGACGTCAAAGAAAAAGTTACAGAGAACCATTTGTTCAGCATGAGAGGAGGTTTAAAAATGACAAGGAGAAGGTGCAAAAATGGAGGCGGGCTCTACAAGATGCTGCTAATCTCTCGGGTTTCCATTTCAAACCTGGATGTCAATACGAATATGCTTTTATCAAAGCGATTGTTAAAGAGGTCACTAGGAGAATCAACCGCAAGCCTTTACACATTGCCAATTTTCCGGTTGGACTTGAGTATCGAGTGCGAAAGGTAAATTCTCTTCTAAATGTTGAATCTAATGAAGGGGTCCAAATAGTAGGAATATGTGGCACTGGTGGAATAGGAAAATCAACAATTGCTCGAGCAGTATGCAGCTCGATTGTGGACTCATTCGAAGGCTTTTGTTTTCTTGCTGATGTCAGAGAAAATTCAATTAATCATGGCCTAGCATATGTCCAGGAAATGCTTCTTTCTGAACTGTTGGAGGAGGACATCAAGTTAAGAGATGTTAACAAAGGAATTCCAATAATAAAGCATAGGCTCCACAAAAAGAAGGTTCTTCTTGTTCTTGATGATGTTGATAAGCTAAAGCAATTACAAGCAATTGCTGGAGGACTTGATTGGTTCGGTTCTGGTAGTAGAATTATTTTAACAACAAGGGATAAGCATTTGCTAGTAAGCCATGGTGTTAAAAGAATTTATGAGGTAGACTGTTTAAATAAAGAAGAAGGTCTTGAATTGCTTAAATGGCATGCTTTTAAACGAAGTAGTGTTGATGCAAGTTACATGGACGTTTTAAACAATGTCGTACTCTATGCTGGTGGTCTTCCATTGGCGTTGGAAGTTGTAGGTTCCAACTTGTTCAGTAGAGAAATAAATGATTGGAATTCCGCATTAGAAAGTTATCATAGTATGCCAATTAAAGAGATCCAACAAATCTTGAAGGTAAGCTATGATGCTTTGGAGGAATACGAGCAGGAAATTTTTCTTGACATTGCTTGCTGCTTTAAAGGTGACAGTTTTGAATATGTAAGAAGTGCTTTGTACGCACGTGGTATATGCCCAGATTATGGTGTTAAGGTATTGATTGATAAGTGTCTGATAAAGATTAATCATGGTAAGGTGACTATGCATGATTTGATTCAAGCCATGGGTAAAGAAATTGTGCGGCAGAAGTCACTATATGAGCCTGGAAAGCGCACTAGGTTATGGTTTCATAAAGACATTCTTAATGTGTTGGAAGAAAACAAGGGTTCTGGGAAGATTGAAGCCATAAATCTAGACATGCCTGGAGATATGGTGATTGATTGGAGTGGAAAGGCCTTCAAAAAGATGCCAAATCTTAAGATACTTATTATCAGAAATGCACAGTTTTCTACTGGCCCCAAGTATCTCCCCAACAGTTTAAGAGTGTTGGACTGGAAGGGATATCCTTGTCCAACTTTACCGCCTGACTTCAACCCCCGGGAGCTAATTATCCTCAAAATGCCAGAAAGTTTCCTCAAACGCGATAAGTTTCAGTCTTTGAGCTTGATGAATTTCAGAGGCTGCAAATATTTAAGACAAGTTTCTGACTTATCTGCAGTGCCAGATTTGAGGGAATTGTGTTTGGAAGGCTGCAAAAAGTTAACTGAAATTCACGTGTCCATTGGATTTCTTGGTAAACTTAAAAGGTTGAGTGTTAAACACTGTAAGAAGCTCAAGGCCTTTCCAAGCATCAAGTTAACATCCCTAGAGTTTCTCGACCTTTCTGGGTGCTCCAGCCTCACAAGATTCCCAGAAATATTAGGAACGATGGGAAATATCAAAGAGGCTTTACATGAGGTTGATGGCTTGAAATTCATAGTAGAAGAAGATAAGACCCCAGAATGGTTTGACCGCTATGTTGAGGGACATTCATTGTCTTTTTCGTTCCAAAAGGAATTCCCTAACATGGCTGTATGTTTTGGTGCATTGATAGAGGACGTATGGCACTCGCCACCAAAAATGCTCATTGACGTCCGAGTTAATGGCACAGATGTTGGATTTCCAGAAGGGCAAACAATCTTTGCACCACTTACAACGCCACATGTCTTTTTGTTTGATTTGCGACCGCTTGTTCTTGAGGATAAACTGAAAAGGGCAGTTTCAGAGTGTGGGTGGAACCACGTGGAGATATCCTTTGTCTTGAGTTACACAACGTGCTACCATCCAGCGGTAATGGATTTGGATGGAATATGTGGTATAGCACTGGCAAAATGGAGTGCAGCATATGTGTACAAGCAAAAATCCAGAATGGAAGATGTTCGGTTCGTAAATCATAGACAGGAAGTAGTACCTGAGTTATTGAAAGGATCTTCGATGAATCCCGACAGATTTGAAGAAATAGTCGTACGTAGAGCCATGGAAAACAGCAGCAACAATGCAGTCATGCCCCTTCTGCCCGAACCCATTACTGAACTGAGAAAAAGGAAGAGGGACGGGAGAGATCTATCAACACGGGTCCCATCTCCTTGCGCTCGTTCTCTTCACTGTTCGTCCCCCTTGGATGAGAAAGGATGA 2880 0.4056 MAEQPPFSSSFSHGWPYDVFLNFRGEDTRFDFARNLYEALQQKGIRTFLDNERLRKGEKITPSLLKAIQESRMAISIFSRNYASSTFCLDELVQILEHINKKGRLVLPIFYNVDPSEVRRQRKSYREPFVQHERRFKNDKEKVQKWRRALQDAANLSGFHFKPGCQYEYAFIKAIVKEVTRRINRKPLHIANFPVGLEYRVRKVNSLLNVESNEGVQIVGICGTGGIGKSTIARAVCSSIVDSFEGFCFLADVRENSINHGLAYVQEMLLSELLEEDIKLRDVNKGIPIIKHRLHKKKVLLVLDDVDKLKQLQAIAGGLDWFGSGSRIILTTRDKHLLVSHGVKRIYEVDCLNKEEGLELLKWHAFKRSSVDASYMDVLNNVVLYAGGLPLALEVVGSNLFSREINDWNSALESYHSMPIKEIQQILKVSYDALEEYEQEIFLDIACCFKGDSFEYVRSALYARGICPDYGVKVLIDKCLIKINHGKVTMHDLIQAMGKEIVRQKSLYEPGKRTRLWFHKDILNVLEENKGSGKIEAINLDMPGDMVIDWSGKAFKKMPNLKILIIRNAQFSTGPKYLPNSLRVLDWKGYPCPTLPPDFNPRELIILKMPESFLKRDKFQSLSLMNFRGCKYLRQVSDLSAVPDLRELCLEGCKKLTEIHVSIGFLGKLKRLSVKHCKKLKAFPSIKLTSLEFLDLSGCSSLTRFPEILGTMGNIKEALHEVDGLKFIVEEDKTPEWFDRYVEGHSLSFSFQKEFPNMAVCFGALIEDVWHSPPKMLIDVRVNGTDVGFPEGQTIFAPLTTPHVFLFDLRPLVLEDKLKRAVSECGWNHVEISFVLSYTTCYHPAVMDLDGICGIALAKWSAAYVYKQKSRMEDVRFVNHRQEVVPELLKGSSMNPDRFEEIVVRRAMENSSNNAVMPLLPEPITELRKRKRDGRDLSTRVPSPCARSLHCSSPLDEKG 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5058g00003 959 Gene3D - 351 435 IPR042197 -
Pral5058g00003 959 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 159 IPR035897 -
Pral5058g00003 959 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Pral5058g00003 959 Gene3D Ribonuclease Inhibitor 543 721 IPR032675 -
Pral5058g00003 959 Gene3D - 181 345 IPR027417 -
Pral5058g00003 959 PRINTS Disease resistance protein signature 218 233 - -
Pral5058g00003 959 PRINTS Disease resistance protein signature 686 702 - -
Pral5058g00003 959 PRINTS Disease resistance protein signature 386 400 - -
Pral5058g00003 959 PRINTS Disease resistance protein signature 293 307 - -
Pral5058g00003 959 SMART till_3 16 156 IPR000157 GO:0007165
Pral5058g00003 959 Gene3D - 14 180 IPR035897 -
Pral5058g00003 959 MobiDBLite consensus disorder prediction 927 959 - -
Pral5058g00003 959 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Pral5058g00003 959 SMART AAA_5 215 352 IPR003593 GO:0016887
Pral5058g00003 959 SUPERFAMILY "Winged helix" DNA-binding domain 421 527 IPR036390 -
Pral5058g00003 959 Pfam TIR domain 17 184 IPR000157 GO:0007165
Pral5058g00003 959 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 721 IPR044974 GO:0006952
Pral5058g00003 959 SUPERFAMILY L domain-like 534 715 - -
Pral5058g00003 959 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 445 IPR027417 -
Pral5058g00003 959 Pfam NB-ARC domain 198 436 IPR002182 GO:0043531
Pral5058g00003 959 Coils Coil 420 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5058g00003 Pral-Chr5058 21072 25530 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5058g00003 11 717 WRKY Transcription Factor Family AT4G12020 31.880 9.39e-83 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5058g00003 - - pcin:129295008 1020.38