Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5058g00001 ATGGCTGGGCAATCACCATTTTCCCTGTCCTCCTCTTATGGATGGACTTATGATGTGTTTTCTCAATTTCAGAGATATCAATATGAATATGCTTTGATTAAAGCAATTGTTAAAGAGGTCACTAAGAGAGTTAACCGCAAGCCTTTACACATTGCTGATTATCCAGTTGGACTTGAGTATCGAGTGCGAAAAGTAAATTCTCTTCTAAATGTTGAATCTAATGAAGGGGTCCAAATGGTAGGAATATGTGGCACTGGTGGAATAGGAAAATCAACAATTGCTCGAGCAGTATGCAGTTCGATTGTGGACTCATTCGAAGGCTTTTGTTTCCTTGCTGATGTTAGAGAAAATTCAATTAATCATGGCCTAGCATATGTCCAGGAAATGCTTCTTTTCTGAACTTTGGAGGAGGACATCAAGTTAAGAGATGTTAATAAAGGAATTCCAACAATAAAGCATAGGCTCCACAAAAAGAAGGTTCTTCTTGTTCTTGATGATGTTGATAAGCCAAAGCAATTACAAGCAATTGCTGGGGGACTTGATTGGTTTGGTTCTGGTAGTAGAATCATTGTAACAACAAGGGATCAGCATTTGCTAGTAAGCCATGGTGTTAAAAGAATTTATGAGGTAGACTGTTTAAATAAAGAAGAAGGTCTCGAATTGCTTAAATGGCATGCTTTTAAACAAAGTAGTGTTGATTCAAGTTGCATGGGCGTTTTAAACAATGTAGTACTCTATGCTGGTGGTCTTCCATTGGCGTTGGAAGTTATAGGTTCCAACTTGTTCGGTAGAGAAACAAATGATTGGAATTCTGCATTAGAAAGTTATCGTAGTATTCCAATTAAAGAGATCCAACAAATCCTGAAGGTAAGCTATGATGCTTTGGAGGAATACGAACAGGAAATCTTTCTTGACATTGCTTGCTGCTTTCAAGGTGACAGTTTTGAATATGTAAGAAGTGCATTGTATGCACGTGGTATATGCCCGGATTATGGTGTTCAAGTGTTGATTGATAAATGTCTCATAAAGATGAATCATGGTAAGGTGACGATGCACGATTTGATTCAAGCCATGGGTAAAGAAATTGTGCGACAGAAATCACCATATGAGAGTGAAAGCGCACTAGGTTGGTTTCATAAACATTCTTAA 1149 0.3786 MAGQSPFSLSSSYGWTYDVFSQFQRYQYEYALIKAIVKEVTKRVNRKPLHIADYPVGLEYRVRKVNSLLNVESNEGVQMVGICGTGGIGKSTIARAVCSSIVDSFEGFCFLADVRENSINHGLAYVQEMLLFXTLEEDIKLRDVNKGIPTIKHRLHKKKVLLVLDDVDKPKQLQAIAGGLDWFGSGSRIIVTTRDQHLLVSHGVKRIYEVDCLNKEEGLELLKWHAFKQSSVDSSCMGVLNNVVLYAGGLPLALEVIGSNLFGRETNDWNSALESYRSIPIKEIQQILKVSYDALEEYEQEIFLDIACCFQGDSFEYVRSALYARGICPDYGVQVLIDKCLIKMNHGKVTMHDLIQAMGKEIVRQKSPYESESALGWFHKHS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5058g00001 382 Pfam NB-ARC domain 59 296 IPR002182 GO:0043531
Pral5058g00001 382 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 373 IPR044974 GO:0006952
Pral5058g00001 382 Gene3D - 212 296 IPR042197 -
Pral5058g00001 382 SMART AAA_5 76 213 IPR003593 GO:0016887
Pral5058g00001 382 Coils Coil 281 301 - -
Pral5058g00001 382 SUPERFAMILY "Winged helix" DNA-binding domain 282 367 IPR036390 -
Pral5058g00001 382 Gene3D - 37 206 IPR027417 -
Pral5058g00001 382 PRINTS Disease resistance protein signature 154 168 - -
Pral5058g00001 382 PRINTS Disease resistance protein signature 247 261 - -
Pral5058g00001 382 PRINTS Disease resistance protein signature 79 94 - -
Pral5058g00001 382 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 306 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5058g00001 Pral-Chr5058 4903 6930 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5058g00001 56 377 WRKY Transcription Factor Family AT5G45050 32.012 1.26e-49 177