Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5054g00006 ATGTCCCCCAAAACAATGTGGGAAGGGATGAAGGCTCCCCAGCAAGTTCAAATCGACTCAGAAGCTATGCATCAAGAGAGGATTAAGGTCGGCCCTTTTTGTGTTCCCAATAATGTTGTGGACGAACCTGACTTACAGTTGATACAATACGTTTTTGAGCGTTTAAGTGATAGATGTGAAATTTTTTCGTCGCATCGTTCTTTTCTGTATCAATCTCAATTGACCACACTTAGACCAGGGGCTCATTTGGATTCATCGGTAATAGATTTTTTTGCTGATATCCTCACTGACAATGAAAGGAGAAACAAAAGTAAAGTTTCGAATTGGTATCTTCCGGTGATGTTTTCGAAAGCACTCGATAGTGGTGATGTAAGTTTCTTCCTTGACTTTGTTCAGCGGAATAATATGAGAGACAACTACATGTCTGAATCGGTGGATTGTGAGAAGATATTTATTCCTGTTCATGTTGAGAAAAATTCATGTGGACATTATTATCTATATATTATTCATACGAAGAATCAGGAAGTTGAAATATGGGATTCTCTATGTGATCGATTTATGGATGAAACTAAACGCGACCAAACAACAGAGAACCTGCTGCTTGCCATGGATAATCTCTTTGAAAATGTTATGTTCACGAAATTTGATAGGAGAATGGCGAGCAATATCTTATTACAGCCTAATGGACATGATTGTGGTATATTTGTTATTAATTATATGCAACAATCAGATCATTATGTGACGCAAAATCCCTTATTTCAGTTTGACAGTGATAAAGAAAGGTTGGATTTGGCTTTAAAGTTACTCAAGAGTAACCTGAATAATGAACAAGAAAGACTATATGATGAAGCAGCAAGAAGTTATGCAAAAGCCCATAGTGAAGAAGATTTAGATTTACGTGGAACTAAAAGAAAGTGGGTTGAAGATGTTGGAAGAGGAGGGGCATACATGGAATTGGATGATTCTGATAATACAGTGAAGAGAAAAAATGTTCGTTTGAAAACAGAATGTTCTAGAGGTTATTTGTTGCCGCCAATTGATTTATTGGGAGAAGAGTTTCAAAGGTATACTCAACAAATATGGAAATGGATAACAGAAGATGAGGTGTCAGCCATTGGGATATGGGGAATGGGCGGAGCAGGGAAAACAGCTTTGGCAACTCATGTGCATAACAAACTTTTAGAAGAAGCTGGTGATGACTTTGAGCAAATTATTTGGGTTACCGTGTCACATTATGATGATAGCATTTGCAAGTTGCAAAAGGCCATTGCAAGATCAATTAATTTAGACATATCTGATGAGTGTGATGTCAAAAGGATATCAGGGAAATTATTGCATGCATTCAAACACATAACTAGATGTGTCGTCATTTTAGATGATGTTTGGAATCCTATCTATTTAGAAGAGGTTGGATTTCCAGTTTCAAATAATGGGATTAAATTGATTTTGACAACTCGATTGTGGGAAGTGTGCCAAAGTATGAATTGTATGAAGAACATAATAGAAGTAGAACCTCTAGGCAAAGAAGATGGTTTTGATTTGTTTAAAAAGACTCTTGGAGTCCATCAAATACAACCGATTGGGGTGGAGCCTAAAGCAAGGGCGGTGGCAAAACAATGTGAGCGTTTGCCCCTTGCAATTGTTATGATAGCAAGAAGCATGAAGGGAAAAGAGCACATAAGAGAATGGGATCATTTGTTGGAATGCCTTCAAAACAAGGGTGACGAGCAATATCATATGGATGAGAGGGTATTTCAAGTATTGAAATCTAGTTATTCTTTCTTAAATGATAAATTGCAAAGGTTTTTTTTGTATTGTGCATTTAGTGTCAGCAAGACTGTTTGGGATAGCGATATTGAGCCTTTGGTTAGAAGATTTTGCTATGGGGAATGGACAGATGGGACAAAGAGCTTCACGATGCGATATAATGAAGGTTATGCCATGTGGCAAAAGTTAAAAAATAGCAGTTTGTTGTTGAAAAAGAATGGGACATGGAGAGTGCACACTTTACTTCAGGTCATGGCTCTTACTATTGCAAAGAAGACTGAAAAAATCATGACAAAACATGGTATGAATTTAATAGGATTGTCAGAGAATGGAAAATGGAATGAAAATTTGCAGAATGTTTTTCTAAGTAGAAGCAACGTACCGCAAATTTTTAATGATACATCTCCCAAGTGCTCTAAACTCTCCGCATTACTTTTAGATTCTAATTTTTATCTCAAATGGATTCCAGATGATTTTTTTATTAACATGCCTGCCCTTAAAATACTTGATTTGTCTCGGACAAGCATTGGGCATTTGCCCAAATCTGTATCTAACTTGGAATGTCTCATTGCATTATTACTTTCACGATGTGGAGAATTGAAGTATGTCCCTTCATTAGCAAAACTGCGGCGTTTAATAGAGTTGGACCTTTCATGTACTGCAATCAGTGAAGAACCTTGTGGCTTGGAATTGTTGGTCAATCTTGAATTGTTGAATCTAGAAGGTACAGGTGGGTTCACAATCTCATCATCAACAATATCCGAATTGACCAATCTACAGTCTCTGTTGATGAGGTGCCACTCAACGTCAATGGATCTACGAGGTTTGAGAAAGCTGAAAGTTATATCAGTCACTTTTTGTGATATTGAAAAGTTTAATGACTTTGTTATAAGTTTCCTAGATGAAGATCGCGGACTCAAAGGTTATTATCTAAGTTTAGTCATACCACCTTGTGATGATGATGATTCACTTGATGAAGAAGCCTGCCACTTGAAAAGGGTGTTTTTATGTGGTATTGATTGGGCAAATAGAGTAGCGGTACTTCCAGGAGACGTCAAAGAGTTGATTATAAGCGAGTGCGACCATTTGACAAGGACAACTTGCCTTTGCTGTGCTTTATCAGTCCAAAAAAATAATAATAATTTACCAAAAATTGAATGGTTCGAAATAAGGGCATGCGATGAGCTGGAGTACTTGTTCTGTGGCACTCCCACTTGCTCATTTTGCGCCTCTGTCATGTTAGTTGAAAGGCTGTACCTTGATGAGTTGAAAAACTTGACACAAATAGTGATGCCACTTCCTCTGTCCTTGAATAGCCTGTTCCTTTATCTCAGAGAACTCCATATTCAGGAATGTAGCGGAATGACGATTCTGATGACGTCAGAATTATTAGCACAGCTCCAAAACCTAGAGACTATTTCTGTTGCAGATTGTGAGTCGATGGAAGAAATAATTAGAGAGAATGGCGAGGGACCATGCTCTGTCCTTCTCTCCAATGTTTTGAGGCCCGATACTGTGAGAAACTAA 3294 0.3774 MSPKTMWEGMKAPQQVQIDSEAMHQERIKVGPFCVPNNVVDEPDLQLIQYVFERLSDRCEIFSSHRSFLYQSQLTTLRPGAHLDSSVIDFFADILTDNERRNKSKVSNWYLPVMFSKALDSGDVSFFLDFVQRNNMRDNYMSESVDCEKIFIPVHVEKNSCGHYYLYIIHTKNQEVEIWDSLCDRFMDETKRDQTTENLLLAMDNLFENVMFTKFDRRMASNILLQPNGHDCGIFVINYMQQSDHYVTQNPLFQFDSDKERLDLALKLLKSNLNNEQERLYDEAARSYAKAHSEEDLDLRGTKRKWVEDVGRGGAYMELDDSDNTVKRKNVRLKTECSRGYLLPPIDLLGEEFQRYTQQIWKWITEDEVSAIGIWGMGGAGKTALATHVHNKLLEEAGDDFEQIIWVTVSHYDDSICKLQKAIARSINLDISDECDVKRISGKLLHAFKHITRCVVILDDVWNPIYLEEVGFPVSNNGIKLILTTRLWEVCQSMNCMKNIIEVEPLGKEDGFDLFKKTLGVHQIQPIGVEPKARAVAKQCERLPLAIVMIARSMKGKEHIREWDHLLECLQNKGDEQYHMDERVFQVLKSSYSFLNDKLQRFFLYCAFSVSKTVWDSDIEPLVRRFCYGEWTDGTKSFTMRYNEGYAMWQKLKNSSLLLKKNGTWRVHTLLQVMALTIAKKTEKIMTKHGMNLIGLSENGKWNENLQNVFLSRSNVPQIFNDTSPKCSKLSALLLDSNFYLKWIPDDFFINMPALKILDLSRTSIGHLPKSVSNLECLIALLLSRCGELKYVPSLAKLRRLIELDLSCTAISEEPCGLELLVNLELLNLEGTGGFTISSSTISELTNLQSLLMRCHSTSMDLRGLRKLKVISVTFCDIEKFNDFVISFLDEDRGLKGYYLSLVIPPCDDDDSLDEEACHLKRVFLCGIDWANRVAVLPGDVKELIISECDHLTRTTCLCCALSVQKNNNNLPKIEWFEIRACDELEYLFCGTPTCSFCASVMLVERLYLDELKNLTQIVMPLPLSLNSLFLYLRELHIQECSGMTILMTSELLAQLQNLETISVADCESMEEIIRENGEGPCSVLLSNVLRPDTVRN 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5054g00006 1097 Pfam Ulp1 protease family, C-terminal catalytic domain 82 265 IPR003653 GO:0006508|GO:0008234
Pral5054g00006 1097 SUPERFAMILY Cysteine proteinases 40 271 IPR038765 -
Pral5054g00006 1097 Pfam NB-ARC domain 357 593 IPR002182 GO:0043531
Pral5054g00006 1097 Coils Coil 259 279 - -
Pral5054g00006 1097 Gene3D - 347 503 IPR027417 -
Pral5054g00006 1097 Gene3D Adenoviral Proteinase; Chain A 37 273 - -
Pral5054g00006 1097 Gene3D - 506 596 IPR042197 -
Pral5054g00006 1097 Pfam Leucine rich repeat 729 786 IPR001611 GO:0005515
Pral5054g00006 1097 PRINTS Disease resistance protein signature 448 462 - -
Pral5054g00006 1097 PRINTS Disease resistance protein signature 371 386 - -
Pral5054g00006 1097 PRINTS Disease resistance protein signature 750 766 - -
Pral5054g00006 1097 PRINTS Disease resistance protein signature 540 554 - -
Pral5054g00006 1097 FunFam Probable disease resistance protein At1g61300 348 499 - -
Pral5054g00006 1097 Gene3D Ribonuclease Inhibitor 687 1083 IPR032675 -
Pral5054g00006 1097 SUPERFAMILY L domain-like 688 883 - -
Pral5054g00006 1097 ProSiteProfiles Ubiquitin-like protease family profile. 67 243 IPR003653 GO:0006508|GO:0008234
Pral5054g00006 1097 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 355 606 IPR027417 -
Pral5054g00006 1097 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 336 1075 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5054g00006 Pral-Chr5054 124496 129000 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5054g00006 368 875 WRKY Transcription Factor Family AT5G45050 23.529 4.81e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5054g00006 - K13459 pcin:129318063 695.656