Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5054g00003 ATGGCCGGAGCAGGGAAAACAGCTTTAGCAACTCAGGTGCATAACAAACTTTTAGAAGAAGCTGGTGATGACTTCAAGCATATTATTTGGGTTACCGTGTCACAATATGATAATAGCATTTATAAGTTGCAAAAAGTCATTGCAAGATCAATTAATTTAGACATATCTGATGAGTGTGATGTCAAAAGGATATCAGGGATATTATTGCATGCATTCAACCACATAACTAGATGTGTCCTTATTTTAGATGATGTTTGGAATCCTATCTATTTAGAAGAGGTTGGATTTCCAGTTTCAAATAATGGGATTAAATTGATTTTGACAACTCGATTATGGGAAGTGTGCCAAAGTATGAATTGCATGAAGAACATAATAGAAGTAGAACCTCTAAGTAAAGAAGATGGTTTTGATTTGTTTAAAAAGACTCTTGGAGTCCATCAAATACAACCGATTGGGGTGGAGCCTAAAGCAAGGGCGGTGGCAGAACAATGTGAGGGTTTGCCCCTTGCAATTGTTATGATAGCAAGAAGCATGAAGGGAAAAGAGCACATAAGAGAATGGGATCATTTGTTGGAATGCCTTCAAAACATGGGTGACGGGCAATATCATATGGATGAGAGGGTATTTCAGGTATTGAAATCTAGTTATTCTTTCTTAAATGATAAATTGCAAAGGTTTTTTTTGTATTGTGCATTTAGTGTCAGCAAGACTATTCGGGATAGCGATATTGAGCCTTTGGTTAGAAGATTTTGCTATGGGGAATGGACAGATGGGACAAAGAGCTTCACGATGCGATATAATGAAGGTTATGCCATGTGGCAAAAGTTAAAAAATAGCAGTTTGTTGTTGAAAAAGAATGGGACATGGAGAGTGCACACTTTACTTCAGGTCATGGCTCTTACTATTGCAAAGAAGACTGAAAAAATCATGACAAAACATGGTATGAATTTAATAGGATTGTCAGAGAATGGAAAATGGAATGAAAATTTGCAGAATGTTTTTCTAAGTAGAAGCAACATACCGCAAATTTTTAATGATACATCTCCCAAGTGCTCTAAACTCTCCGCATTACTTTTAGATTCTAATTTTCATCTCAAATGGATTCCAGATGATTTTTTTATTAACATGCCTGCCCTTAAAATACTTGATTTGTCTGACACAAGCATTGAGCATTTGCCCAAATCTGTATCTAACTTGGAATGTCTCATTGCATTATTGCTTTCACGATGTGAAAATTTGGAGTATGTCCCTTCATTAGCAAAACTGCGGTGTTTAATAGAGTTGGACCTTTCATATACTGCAATTAGTGAAGAACCTTGTGGCTTGGAATTCTTGGTCAATCTTGAATTGTTGAATCTAGAAGGTACAGATGGGTTCACAATCTCATCATCAACAATATCCGAATTGACCAATCTACAGTCTCTGTTGATGAGGTGGCACTCAACGTCAATGGATCTACGAGGTTTGAGAAAGCTGAAAGTTATATCAGTCACTTTTCGTGATATTGAAAAGTTTAATGACTTTGTTATAAGTTTCCTAGATGAAGATCGCGGACTCAAAGGTTATTATCTAAGTTTAGTCATACCACCTTGTGATGATGATGGTTCCTTGGATGGAGAAACCTGCCACTTGAAAAGGGTGCTTTTATGTGGTATTGATTGGGCAAATAGAGTAGCGGTACCAGGAGACGTCAAAGAGTTGATTATAATCGAAGGTGACTATTTGACAAGGACAACTTGCCTTTGCCGTGCTTTATGGGTCCAAAAAAATAATAATAATTTACCAAAAATTGAATGGTTCGAAATAAGTGAATGCGATAAGCTGGAGTACTTGTTCTGTGGCGCTCCCACTTGCTCATTTTGCGCCTCTGTCATGTTAGTTGAAAGGCTGTACCTTAATGGGCTGAAAAACTTGACACAAATAGTGATACAACTTCCTCTATCTTTGGATAGCCTGTTCCTTTATCTCAGAGAATTCGATATTCAGGGGTGTAGAAAAATGACGATTCTGATGACGTCAGAAATATTAGCACAGCTCCAAAACCTAGAGACTATTTCTGTTGCAGATTGTGAGTCGATGGAAGAAATAATTAGAGAGAATGGCGGCAACACTTTTAACCCTACTATCACTCTTCCCAAAGTGAGATCGTTGAGACTGGAATTTCTACCAGAATTAACTTTTGTATTCAGAGGGACCATGCTCTGTCCTTCTCTCCAATGTTTTGAGGCCCGATACTGTGAGAAACTAAGCCCCCCTCATATAGAGATCACAGAAGGATATAAGCTTCAAATGCAAATGAAAACAGAGGAGACATTCTTGGGACCCCGACCCTATTGGAAATATGATATTCAGGTACAAATCTCCTCCAAGATTTGA 2376 0.3775 MAGAGKTALATQVHNKLLEEAGDDFKHIIWVTVSQYDNSIYKLQKVIARSINLDISDECDVKRISGILLHAFNHITRCVLILDDVWNPIYLEEVGFPVSNNGIKLILTTRLWEVCQSMNCMKNIIEVEPLSKEDGFDLFKKTLGVHQIQPIGVEPKARAVAEQCEGLPLAIVMIARSMKGKEHIREWDHLLECLQNMGDGQYHMDERVFQVLKSSYSFLNDKLQRFFLYCAFSVSKTIRDSDIEPLVRRFCYGEWTDGTKSFTMRYNEGYAMWQKLKNSSLLLKKNGTWRVHTLLQVMALTIAKKTEKIMTKHGMNLIGLSENGKWNENLQNVFLSRSNIPQIFNDTSPKCSKLSALLLDSNFHLKWIPDDFFINMPALKILDLSDTSIEHLPKSVSNLECLIALLLSRCENLEYVPSLAKLRCLIELDLSYTAISEEPCGLEFLVNLELLNLEGTDGFTISSSTISELTNLQSLLMRWHSTSMDLRGLRKLKVISVTFRDIEKFNDFVISFLDEDRGLKGYYLSLVIPPCDDDGSLDGETCHLKRVLLCGIDWANRVAVPGDVKELIIIEGDYLTRTTCLCRALWVQKNNNNLPKIEWFEISECDKLEYLFCGAPTCSFCASVMLVERLYLNGLKNLTQIVIQLPLSLDSLFLYLREFDIQGCRKMTILMTSEILAQLQNLETISVADCESMEEIIRENGGNTFNPTITLPKVRSLRLEFLPELTFVFRGTMLCPSLQCFEARYCEKLSPPHIEITEGYKLQMQMKTEETFLGPRPYWKYDIQVQISSKI 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5054g00003 791 Gene3D Ribonuclease Inhibitor 305 537 IPR032675 -
Pral5054g00003 791 Pfam NB-ARC domain 1 217 IPR002182 GO:0043531
Pral5054g00003 791 SUPERFAMILY L domain-like 313 751 - -
Pral5054g00003 791 PRINTS Disease resistance protein signature 374 390 - -
Pral5054g00003 791 PRINTS Disease resistance protein signature 164 178 - -
Pral5054g00003 791 PRINTS Disease resistance protein signature 72 86 - -
Pral5054g00003 791 Gene3D - 129 220 IPR042197 -
Pral5054g00003 791 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1 749 - -
Pral5054g00003 791 Pfam Leucine rich repeat 353 410 IPR001611 GO:0005515
Pral5054g00003 791 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 230 IPR027417 -
Pral5054g00003 791 Gene3D - 1 127 IPR027417 -
Pral5054g00003 791 Gene3D Ribonuclease Inhibitor 583 768 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5054g00003 Pral-Chr5054 46978 49353 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5054g00003 1 498 WRKY Transcription Factor Family AT5G45050 22.476 1.14e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5054g00003 - K13459 pcin:129318814 489.96