Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5049g00010 ATGGCAATCGGATTCATGGAGGTGCTTGTGGTCAAAGCTAAGGGCCTTCCTCTGTCTGATCTCTTTGCTCGTATCGATCCCTACGTTCTGATCCAGTACAAAGGCCAAGAGCGCCAGACTAGTGTAGTCCATGAGGGAGGTAGCAATCCAGTGTGGAACGAGAAATTTGTATTCAGAGCAGAATATCCTGGATCAGGCGACCAATTCAAGCTCTTCTTTAAAATCAAGGACAAGGACTTCTTCTCTGCTGATGACTTCCTTGGCCAAGCCGAAATATATGTGGAGGATTTGCTGGCTTTAGGAGCAGAGAATGGAAGATCTGAGCTTCATCCTCGAAAGTATAGAGTGGTTGGTGCAGATCAATCTTACTGTGGAGAAATTGAAGTTGGTATAACTTTCACCCTTAAGGAAGAAGACGAATCTCTTGACGAAGACATTGGAGGATGGAAGGAAAGCGACTACTAG 465 0.4538 MAIGFMEVLVVKAKGLPLSDLFARIDPYVLIQYKGQERQTSVVHEGGSNPVWNEKFVFRAEYPGSGDQFKLFFKIKDKDFFSADDFLGQAEIYVEDLLALGAENGRSELHPRKYRVVGADQSYCGEIEVGITFTLKEEDESLDEDIGGWKESDY 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5049g00010 154 Pfam C2 domain 6 100 IPR000008 -
Pral5049g00010 154 Gene3D C2 domain 2 152 IPR035892 -
Pral5049g00010 154 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 134 IPR035892 -
Pral5049g00010 154 SMART C2_3c 5 106 IPR000008 -
Pral5049g00010 154 PANTHER C2 DOMAIN-CONTAINING 3 138 - -
Pral5049g00010 154 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5049g00010 Pral-Chr5049 59151 61052 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5049g00010 3 109 C2H2 Transcription Factor Family AT4G21160 31.776 8.22e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5049g00010 - - gmx:100500493 229.565