Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5047g00026 ATGAACACATTGAGTATAAGCGAGGTCAAATTAATGGAGGAGGAGCCAGGGTTGAGGAAAGGTGCCTGGACCCGAGAGGAAGACGATCTTCTCAAAGCTTACGTTCTCAAGTACGGCGAGGGAAAATGGCATCTTGTTGCCCAAAGAGCTGGTCTGAAGTGCAGGAAAAGCTGCAGAATGAGGTGGTTGAATTATCTGAAACCCAACATCAAGAGAGGAGGCTTCAATGAAGACAAGGTTGATATGATTATGAGGCTCCATAAGCTGCTGGGCAAGAGATGGTCGTTGATAGATGGGAGGCTACCAGGAAGAACAGCAAATGACGTGAAGAACTTCTGGGATACCAAAATGCGCAATATTGTTATTAAGAGACAAGAAAAAGAAAAAGAGGTGAACCAGCTGCTGCGAGCAGAAGAGAAAGGAAAAGTGAAAGAAGCCCGCATAGTAATAAAACCACAGCCTTATGCTTTCTCTGAGAATTCGCCATGGTTGAAGCAGAAGAAGAATAAGCCTGTTACTGCAGCTGAAAGTGCTTCTACTCGTAGCTCTGGCGGCGGCGGTTTTGCACAGCCATGTCCTCCTGCTGGTATTGGCAAGAGCGAGCTGTCAGATCAGGATTGGTGGGAGAGTTTACTAAAGGAGGAAGAATGA 651 0.4639 MNTLSISEVKLMEEEPGLRKGAWTREEDDLLKAYVLKYGEGKWHLVAQRAGLKCRKSCRMRWLNYLKPNIKRGGFNEDKVDMIMRLHKLLGKRWSLIDGRLPGRTANDVKNFWDTKMRNIVIKRQEKEKEVNQLLRAEEKGKVKEARIVIKPQPYAFSENSPWLKQKKNKPVTAAESASTRSSGGGGFAQPCPPAGIGKSELSDQDWWESLLKEEE 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5047g00026 216 Gene3D - 74 148 - -
Pral5047g00026 216 ProSiteProfiles Myb-like domain profile. 15 66 IPR001005 -
Pral5047g00026 216 MobiDBLite consensus disorder prediction 161 204 - -
Pral5047g00026 216 CDD SANT 22 66 IPR001005 -
Pral5047g00026 216 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Pral5047g00026 216 FunFam Myb transcription factor 20 71 - -
Pral5047g00026 216 Coils Coil 117 140 - -
Pral5047g00026 216 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 121 IPR017930 -
Pral5047g00026 216 SMART sant 19 68 IPR001005 -
Pral5047g00026 216 SMART sant 71 119 IPR001005 -
Pral5047g00026 216 CDD SANT 75 113 IPR001005 -
Pral5047g00026 216 SUPERFAMILY Homeodomain-like 17 113 IPR009057 -
Pral5047g00026 216 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 70 IPR017930 -
Pral5047g00026 216 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 14 159 - -
Pral5047g00026 216 Gene3D - 13 72 - -
Pral5047g00026 216 Pfam Myb-like DNA-binding domain 82 113 IPR001005 -
Pral5047g00026 216 Pfam Myb-like DNA-binding domain 20 66 IPR001005 -
Pral5047g00026 216 MobiDBLite consensus disorder prediction 161 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5047g00026 Pral-Chr5047 199850 201876 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5047g00026 12 159 MYB Transcription Factor Family AT1G66370 56.667 1.47e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5047g00026 Myb_DNA-binding 6.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5047g00026 - K09422 pcin:129304058 229.565