Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5047g00010 ATGAAGAGAGAATACCCAGATAACAGTAGTATGGATGGTTGTGGTGGTGGTTTTAAACCTGAATGTTCGTCAATGTCAAGTGGGAAGATGAAGATATGGGAGGATGAGCTCGATGGTTCTGGTGGGATGGATGAGTTACTGGCGGCTTTGGGCTACAAGGTCCGGGCGTCGGACATGGCGGATGTGGCCCAGAAGCTTGAGCGGCTTGAGATGGTTATGGCCATTTCTCAGGAAGACGGGATATCTCATCTTGCTTCTGACACTGTCCACAAAGACCCAACCGATCTCCATGGCTGGGTTCAAAGCATGCTCACCGAGCTCCACGGTTCTCCCAATTGTCTCGATCCGTCGGTACTGTTGGCGAACCAACAAATTGATGGCCCTATTCTACCTCCGGCCTGCTCCTCCGTCATATCCACCGGAAATTTCTCTAATTCTCAGCACCAGATTGAGAATCTGTCGACCGGTTACCACGATGATTCCGAGTATGACCTCCGAGTTATTCCTGGCAAGGCGGCGTTCCCACAAAGCGAAACGACAGATAGTGAGAATAGCCGTAAGCGATTGAAAACTTCACCTTCAACCGAATCCGCTCCGTCGCCGTCCGCTCCGTTGCCGTCGACGGCGGCTGTACCAGAGCACCCTCGTCCGGTGGTTCTGGTTGACTCACAAGAAAACGGGGTGCGTCTCGTGCACGCGCTGATGGCATGTGCGGAGGCGGTTCAGCAGAACAATTTGAAGCTGGCGGAAGCACTTGTGGAGCACGTGGAGAGGCTGGCGGCGTCACAAGCCGGGGCAATGAGGAAGGTGGCTTCCTGCTTCGCTCAAGCTTTTGCTCATCGGATTTACGGAATTTCTCAACCGTCCATCGATTCCGCCTTCTCTGATATGCTCTATATGCATTTCTATGAGTCCTGCCCTTACCTGAAATTCGCCCATTTCACGGCGAACCAAGCCATCCTTGAAGCGTTCGCCACCGCTGATAGAGTTCACGTCATCGATTTCGGGCTCAAGCAGGGGATGCAATGGCCTGCATTAATGCAAGCCCTTGCATTACGACCCGGTGGTCCTCCGACTTTCCGCCTCACCGGAATCGGACCTCCGCATTCGGACAGCACCGATGCTCTTCAACAAGTGGGATGGAAATTGGCGCAATTGGCCAAAACAATCGGAGTCCAATTCGAATTCCGCGGGTTCGTCTGCAAGAGCTTAGTGGATCTCGAGCCGTCGCTCATCGAGATCCGACCCGGAGAAGCGGTTGCGGTTAACTCCGTTTTCGAACTCCACGAGCTCCTGGCCCGACCCAGCGCCATCGACAAGGTCTTGAACACGATCAAGGCCATGAATCCGAAGATCGTGACTGTGGTGGAGCAAGAAGCAAACCACAACGAGACGGCTTTCTTGGACCGTTTCACGGAGGCACTACACTACTACTCAACCATGTTCGACTCACTGGAGGGCTCGTCAAACTCGTCGGGGTTAACGCCGGCGGCCAGTCAGGACGTGCTGATGTCGGAGCTGTATCTCGGTAGGCAGATATGCAACGTGCTGGCGTGTAAAGGGTCCGAGCGAGTGGAGAGGCACGAGACACTGAGTCAGTGGAGGGGTCGGATGGGATCGGCCGGGTTCGAACCGGTTCACCTGGGTTCCAACGCGTTCAAGCAAGCCAGCATGTTATTGGCAGTGTTCGCCGGAGGAGATGGGTACAGAGTGGAAGAGAACAACGGGTGCCTTCTGCTAGGGTGGCACACTCGGCCCCTCATAGCCACTTCGGCTTGGAAAATTCCGGCCGGCGAACTTTAG 1803 0.548 MKREYPDNSSMDGCGGGFKPECSSMSSGKMKIWEDELDGSGGMDELLAALGYKVRASDMADVAQKLERLEMVMAISQEDGISHLASDTVHKDPTDLHGWVQSMLTELHGSPNCLDPSVLLANQQIDGPILPPACSSVISTGNFSNSQHQIENLSTGYHDDSEYDLRVIPGKAAFPQSETTDSENSRKRLKTSPSTESAPSPSAPLPSTAAVPEHPRPVVLVDSQENGVRLVHALMACAEAVQQNNLKLAEALVEHVERLAASQAGAMRKVASCFAQAFAHRIYGISQPSIDSAFSDMLYMHFYESCPYLKFAHFTANQAILEAFATADRVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPHSDSTDALQQVGWKLAQLAKTIGVQFEFRGFVCKSLVDLEPSLIEIRPGEAVAVNSVFELHELLARPSAIDKVLNTIKAMNPKIVTVVEQEANHNETAFLDRFTEALHYYSTMFDSLEGSSNSSGLTPAASQDVLMSELYLGRQICNVLACKGSERVERHETLSQWRGRMGSAGFEPVHLGSNAFKQASMLLAVFAGGDGYRVEENNGCLLLGWHTRPLIATSAWKIPAGEL 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5047g00010 600 Pfam Transcriptional regulator DELLA protein N terminal 44 110 IPR021914 -
Pral5047g00010 600 SMART DELLA_2 44 117 - -
Pral5047g00010 600 MobiDBLite consensus disorder prediction 173 211 - -
Pral5047g00010 600 ProSiteProfiles GRAS family profile. 221 594 IPR005202 -
Pral5047g00010 600 FunFam DELLA protein GAI 42 107 - -
Pral5047g00010 600 Gene3D - 42 107 IPR038088 -
Pral5047g00010 600 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 185 590 IPR005202 -
Pral5047g00010 600 MobiDBLite consensus disorder prediction 1 24 - -
Pral5047g00010 600 Pfam GRAS domain family 230 594 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5047g00010 Pral-Chr5047 57808 59970 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5047g00010 29 595 GRAS Transcription Factor Family AT2G01570 58.992 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral5047g00010 GRAS 5.5e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5047g00010 K14494 - qsa:O6P43_020590 845.114