Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5045g00006 ATGATAAAGGAGTTGGTGCCACTAGGAGGGGCAAATAACCCTGCTGATTTCTTGCCCATATTGAGGTGGTTTGATTTTGCTCACTTGGAGAGCAGGCTCAAGAGTTTCGCCAAGAGAATCGATGGGTTCTTGCAAGGACTCATTGATGAGCATCGAAATGCAAATCAGAGAGCAAATACTATGATCGATCATCTCTTGAGCCTCCAAGAATCGCAGCCTGAGTACTACACGGATCAAATTATTAAGGGCCTCATTTTGGTTATGCTTCTTGCTGGAACGGATACATCAGCTGTGACTTTAGAGTGGGCAATGTCTAGTTTATTGAACAATCCTCATGTGTTAGAAAAAGCAAAGAAAGAAATAGACACATATATAGGGCAAGAACGATTAATAGATGAGCCGGACATCTCGAAACTACCATACCTGCAAAGGATTGTCTCTGAAACACTTCGACTGCATCCAGCTGCACCATTGTTGGTTCCACATGAGGCTTCAGATGATTGCACTATTGCAGGATATAATGTTCCACGAGGCACTATGGTATTAATCAATGCCTGGGCAATTCATAGAGATCCCCAAGTGTGGAGTGATCCTACATGTTTTAAGCCAGAGAGGTTTGAGAAAGAAGGAGAAGCAAACAAGCTGATTCCATTTGGGTTAGGAAGACGAGCATGTCCTGGCTCAGGATTGGCTCAACGAACTGTAGGATTAACTTTGGGATTGTTAATTCAATGCTTTGATTGGAAACGAGCAAGTAAGGAAAAAATTGATATGAGAGAAGGGGAGGGATCACCATGCCAAAAATTATTCCTCTAG 816 0.4265 MIKELVPLGGANNPADFLPILRWFDFAHLESRLKSFAKRIDGFLQGLIDEHRNANQRANTMIDHLLSLQESQPEYYTDQIIKGLILVMLLAGTDTSAVTLEWAMSSLLNNPHVLEKAKKEIDTYIGQERLIDEPDISKLPYLQRIVSETLRLHPAAPLLVPHEASDDCTIAGYNVPRGTMVLINAWAIHRDPQVWSDPTCFKPERFEKEGEANKLIPFGLGRRACPGSGLAQRTVGLTLGLLIQCFDWKRASKEKIDMREGEGSPCQKLFL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5045g00006 271 PRINTS P450 superfamily signature 216 225 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5045g00006 271 PRINTS P450 superfamily signature 144 155 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5045g00006 271 PRINTS P450 superfamily signature 91 108 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5045g00006 271 PRINTS P450 superfamily signature 225 236 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5045g00006 271 Gene3D Cytochrome P450 1 269 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5045g00006 271 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 218 227 IPR017972 GO:0005506|GO:0016705
Pral5045g00006 271 SUPERFAMILY Cytochrome P450 5 260 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5045g00006 271 PRINTS E-class P450 group IV signature 82 108 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5045g00006 271 PRINTS E-class P450 group IV signature 139 155 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5045g00006 271 PRINTS E-class P450 group IV signature 189 207 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5045g00006 271 PRINTS E-class P450 group IV signature 173 187 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5045g00006 271 Pfam Cytochrome P450 14 260 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5045g00006 271 PANTHER CYTOCHROME P450 82C3-RELATED 1 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5045g00006 Pral-Chr5045 69187 70684 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5045g00006 1 263 Cytochrome P450 AT4G37370 64.639 6.87e-126 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5045g00006 K13260 - gmx:100811727 424.476