Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5041g00017 GAGGAAGAGGAGGAGGAGAAGGATCGCAGAGATTTAGAAGCAGAAGAAGAGAACGAGAAAATGAAGGAACATGAAGGTACTTCATCATCAAACAGAAGCACATCAAGAGAACGAAATGAAGGAAAAGGCACAGTGAGACAATATGTCAGATCCAAGATGCCTAGGCTTCGCTGGACTCCAGATCTTCATCTTTCTTTTGTTCATGCTGTTAAACGCCTTGGTGGTCAAGAGAGAGCAACACCCAAGTTGGTGCTTCAGCTAATGAATGTGAGGGGACTCAGCATTGCTCATGTGAAGAGTCACTTGCAGATGTATCGGAGTAAAAAACTTGATGAGGCTGGCCAAGGTGAGCATTATATCCTAATCTCAGTTTAA 375 0.4373 EEEEEEKDRRDLEAEEENEKMKEHEGTSSSNRSTSRERNEGKGTVRQYVRSKMPRLRWTPDLHLSFVHAVKRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQGEHYILISV 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5041g00017 124 MobiDBLite consensus disorder prediction 13 45 - -
Pral5041g00017 124 NCBIfam myb-like DNA-binding domain, SHAQKYF class 54 109 IPR006447 GO:0003677
Pral5041g00017 124 Gene3D - 53 110 - -
Pral5041g00017 124 MobiDBLite consensus disorder prediction 1 48 - -
Pral5041g00017 124 Pfam Myb-like DNA-binding domain 56 106 IPR001005 -
Pral5041g00017 124 SUPERFAMILY Homeodomain-like 52 108 IPR009057 -
Pral5041g00017 124 Coils Coil 2 22 - -
Pral5041g00017 124 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 110 IPR017930 -
Pral5041g00017 124 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 31 113 IPR046955 GO:0003700
Pral5041g00017 124 FunFam Myb family transcription factor 52 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5041g00017 Pral-Chr5041 119229 120215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5041g00017 45 113 G2-like Transcription Factor Family AT2G42660 81.159 5.39e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral5041g00017 Myb_DNA-binding 9.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5041g00017 - - pcin:129286853 193.356