LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5041g00015	ATGGCGATTCGAGTGGAAGCACCATCGTCCTTTAGCTCTCCTACTAAAACCAAGTATGAATACGATGTTTTCCTGAGTTTTAGAGGCGTAGATACTCGCCACACCTTCACTGGGCTTCTCTACGATGCTTTACGACGCAAGGGAATCAACGCCTTCATCGACGACAGGAAGCTTGGAAAGGGGGAAGAGATCTCACCTGCGCTTCTTGAAGCCATTGAGAGATCCAGGATTTCCATTGTTGTGTTCTCTAGGAACTATGCTACTTCCAAATGGTGCTTAGACGAACTCGACCACATCATTTGGTGTAAGAAGGAGAAGAAGCAGGTGGTTATGCCCGTCTTTTACAAGGTCGATCCGTTAGATGTTCAATATCAGAGAAATAGCTTTGAGAAAGCCATGGCTGCTCTTCAAGATAGGTTCAAAGATGACTTAGACAAAGTGCGCAGATGGAGGTCTGATTTGTGTGAAGCCGCTAGCTTATCATCTGCATGGCTTTTCGATGATGGATGCAAACTTGGGTTTATCGAAAGGATTGTGGAAGATGCACGTGCTATGCTACCACCCAACCCTTTACATAGCGTTGATCACCCAGTTGGACTTAAGTCTCGCATTGAAGAAGTGAAGTCACTTTTGGATCAGTCTCATGATGGCGTTTGTATGTTGGGGATCCATGGAACTGGTGGAATTGGAAAAACAACACTTGCCAAGGCTCTATATAATTCAATATTTTGCCAATTTGAAGGTGCAAGTTTTCTATTTGATGTCAGAGAAGCATCAAATGAATATCGAGGCATAGTTCGTCTCCAACAATTACTTTTATCTGAGATTCTTGAAGAGAAGAGTAAGAAGTTTGGTAGTGTTGATGAAGGAATAACTAAAATAAAACACAGACTCTCCCACAAAAGAGTTCTATTAGTTCTTGATGATGTTGATGCATTAGAACAATTAGAACAACTTGCAGGAGGGTGTAACTGGTTTGGATCCGGAAGCAAGATCATTATAACGACTAGAGATAAGCAATTATTAAGTGTACATGGTGTTCAAGAAACTTATGAAATGAAGGAGCTAAATGAGCATGAGTCTCTTGAACTCTTCTCTTGGCATGCCTTTCATAGCAGTCATCCTTCCAAAGGCTTTGAAGATATATCTGCCCGTGTGATTAGTTATGCCCAGGGCCTTCCTTTGGCTCTAAGAGTAATAGGCTCCAATTTGACTCATAAAAGCTTAGAGGAATGGAGGTCAATATTGGAACAATACGATAGGATCCCAGATAAAACAATTCACGAAGTACTAAAGATTAGTTACGATTGCTTACAAGACAATGCAAAGTCTATCTTTTTAGATGTTGCTTGTTTTTTCAAGAAGTGGAGATCGGTATATGCCAATGAAGTACTACACACCTGTCATGGTGGTGCAAGGTTTTACTTTGAAGTGCTCATTGATAAATCATTGCTGAGTGTTGATAAATATGATTGCTTGTGGATGCATGATCTAATACAAGAAATGGGTCGAGAAATTGTTAGACGGGAGGCACCATTAAATCCTGGTGAACGCAGCAGATTGTGGCACCATGAAGATGTTGTTAGAGTATTACGTGAAAATTCTGGAAGCAGCAAAATTGAAGGAATAATGCTTAAATCTCCTCAACAAGAAAAAGTAGCGTGGAGTGGCTTTGCCTTCGAGAAAATGAGCAATCTTAGGATTCTCATTGTGCGAAATGCACTATTTTCAACCGGCCCTAAGCACTTCCCAAATAATTTAAGATTGCTTGATTGGGAGCGATACCCTTCTATGACCTTACCAGAGGATTTTTATCCTGAGAACATTGTTGTCCTTAGGTTATGTCGTAGTTATGTCAGATTAGTGGAGCCAATCAAGAGGTTAGAATATGTGACAAGCATGGATTTCTCATATTGCGAATTTATAACTGAAGTGCCTATTATGTCTCAAGTCCCAAATTTAAAAGAACTGATATTTGTAGGCTGTTGCAATTTGATTAAGGTTCATGATTCTGTGGGATATCTCTCTAAGTTAGCGGTATTAACCGTTAATGGCTGCAGCAAACTTAAAAGCTTTCCTCGTGAAATCAAATTGGCGTCTCTTGAGCACCTTGACCTTGCTTTTTGTGAGAGTCTTGATTACTTCCCAAATATAGTGGGAAAGATGGACGCATTGAATACCATTCTTGCAGATAACACTGCTATTGAAGAACTCCCACATTCCATTGGAAATCTCTCAGGGCTTCAAATTTTATCTCTTAACTCCTGCGAAGGTCTTAGGGAGATTCCAGACACAATATTCACGCTGGAAAATCTTGTCTGGCTTTTATTGGAGAATAGTAGACCTCATAGCAGAAAATCCTTGAAGAAGTCAATGCAAGATAGTTATCCAATTATTAGAAGCACAAACTTGAAGATTTTGAATCTAGAAAATTGTGGTCTATTGGATGAAGATCTTCACCTAACTGTGAATTGTTTTCGGAATCTGCAAGAATTAAATCTATCAGGGAATGATATCTTGTCCCTTCCTGACTGCATCAAAGAGTGTGCTTATTTGGAGAAACTAAATCTGGATAACTGCAAGAGGCTAAGAGACATTCCAGAGCTGCCACCAAACCTGGCGGATATACAAGCAGACAATTGCATATCATTAACGAGAAAGTCCTTAAGCCATTTATGGTCCCAGGTTATTCATTCTCTTTCCCATTTGGCTTTATCATTTTAA	2724	0.399	MAIRVEAPSSFSSPTKTKYEYDVFLSFRGVDTRHTFTGLLYDALRRKGINAFIDDRKLGKGEEISPALLEAIERSRISIVVFSRNYATSKWCLDELDHIIWCKKEKKQVVMPVFYKVDPLDVQYQRNSFEKAMAALQDRFKDDLDKVRRWRSDLCEAASLSSAWLFDDGCKLGFIERIVEDARAMLPPNPLHSVDHPVGLKSRIEEVKSLLDQSHDGVCMLGIHGTGGIGKTTLAKALYNSIFCQFEGASFLFDVREASNEYRGIVRLQQLLLSEILEEKSKKFGSVDEGITKIKHRLSHKRVLLVLDDVDALEQLEQLAGGCNWFGSGSKIIITTRDKQLLSVHGVQETYEMKELNEHESLELFSWHAFHSSHPSKGFEDISARVISYAQGLPLALRVIGSNLTHKSLEEWRSILEQYDRIPDKTIHEVLKISYDCLQDNAKSIFLDVACFFKKWRSVYANEVLHTCHGGARFYFEVLIDKSLLSVDKYDCLWMHDLIQEMGREIVRREAPLNPGERSRLWHHEDVVRVLRENSGSSKIEGIMLKSPQQEKVAWSGFAFEKMSNLRILIVRNALFSTGPKHFPNNLRLLDWERYPSMTLPEDFYPENIVVLRLCRSYVRLVEPIKRLEYVTSMDFSYCEFITEVPIMSQVPNLKELIFVGCCNLIKVHDSVGYLSKLAVLTVNGCSKLKSFPREIKLASLEHLDLAFCESLDYFPNIVGKMDALNTILADNTAIEELPHSIGNLSGLQILSLNSCEGLREIPDTIFTLENLVWLLLENSRPHSRKSLKKSMQDSYPIIRSTNLKILNLENCGLLDEDLHLTVNCFRNLQELNLSGNDILSLPDCIKECAYLEKLNLDNCKRLRDIPELPPNLADIQADNCISLTRKSLSHLWSQVIHSLSHLALSF	907

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5041g00015	907	Gene3D	-	355	439	IPR042197	-
	Pral5041g00015	907	Gene3D	-	188	351	IPR027417	-
	Pral5041g00015	907	Pfam	TIR domain	21	162	IPR000157	GO:0007165
	Pral5041g00015	907	Gene3D	Ribonuclease Inhibitor	555	728	IPR032675	-
	Pral5041g00015	907	Pfam	NB-ARC domain	202	425	IPR002182	GO:0043531
	Pral5041g00015	907	ProSiteProfiles	Leucine-rich repeat profile.	828	849	IPR001611	GO:0005515
	Pral5041g00015	907	Gene3D	-	15	187	IPR035897	-
	Pral5041g00015	907	PRINTS	Disease resistance protein signature	297	311	-	-
	Pral5041g00015	907	PRINTS	Disease resistance protein signature	220	235	-	-
	Pral5041g00015	907	PRINTS	Disease resistance protein signature	696	712	-	-
	Pral5041g00015	907	PRINTS	Disease resistance protein signature	390	404	-	-
	Pral5041g00015	907	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	185	448	IPR027417	-
	Pral5041g00015	907	SUPERFAMILY	L domain-like	494	899	-	-
	Pral5041g00015	907	ProSiteProfiles	TIR domain profile.	19	186	IPR000157	GO:0007165
	Pral5041g00015	907	SMART	till_3	20	160	IPR000157	GO:0007165
	Pral5041g00015	907	SUPERFAMILY	Toll/Interleukin receptor TIR domain	10	160	IPR035897	-
	Pral5041g00015	907	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	21	764	IPR044974	GO:0006952
	Pral5041g00015	907	FunFam	Disease resistance protein (TIR-NBS-LRR class)	17	187	-	-
	Pral5041g00015	907	Gene3D	Ribonuclease Inhibitor	729	907	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5041g00015	Pral-Chr5041	73111	76682	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5041g00015	20	777	WRKY Transcription Factor Family	AT4G12020	30.977	2.36e-90	313

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5041g00015	-		-	pcin:129286217	1156.74