Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5041g00012 ATGATTGGGAGTGTTGATCAAGGAATATCAAGAATAAAACATAGACTTTCTCACAAAAAGGTTCTTTTGGTTCTTGATGACGTTGATGAGGTTGAACAGTTAGAAAAACTCGCGGGAGGGTGTGATTGCTTTGGTTTTGGAAGCAAAGTCATTATAACAACAAGAAATAAGCAATTGCTAGTTGCACACGATGTTGAAAAAACGTATGAAATGATCAAGTTGAATGAGTATGACTCTGGTGAGCTCTTTTGCTGGCATGCCTTCCAAATGAACCAACCTCCCTTAACCTATCAAGATATGTCTAGTCGTGCATTAAGTTATGCACAAGGCCTTCCTCTGGCATTAAAAGTAATTGGCTCCAATTTGGCAAATAAAAATTTAGAGGAGTGGAAGTCTATATTGGAACAATATGAAAGGATCCCAGAAAGAACAATTCATGAGCTTCTAAAGATAAGCTATAATTGCTTACAGGCCGGTGCTAAGCGTATTTTCTTAGATATTGCTTGTTTTGTTAACAAAGAGATGATGGGATCTACTAAAGAAATAGTAGAAGCTTGTGATTTTGGTGCTAGGTTTTATCTTGAAGTTCTTGTTGATAAATCTCTAATAACTTCAGTTCCTGGAGATGATGACTTTTTCATGCATGATCTAATAAGACAAATGGGAAGAGAGATCGTCAGACAAGAAGCACCATTAAATCCTGAAAAGCGCAGCAGATTATGGTATTACGAAGATGTTCTTAAAGTACTAAGTGAAAATTTAGGATGCAATAATATTGAAGGAATAATGCTTGATCCTCCTCAGCAAGAGAAAGTAAAATGGAGTGGTATGGCCTTTGAGAAGATGAATAACCTTAGAATTCTTGTTGCTCGAAATGTTCAATTTTCAACTGGTCCTGCCTATCTACCCAATAGCTTAAGGTGGCTTGAGTGGGAGGGGTATCCTTCTGCAACTTTGCCAAAAGATTTCTCTCCTTCAGAATTAATCTTCTTGAAGTTACCTGGAAGTTCTTTTAGACTAAGAGAGCCATCCAAGATTTTCACTAGCTATGTGACACATTTGGAGTTTTCATTTTGTGAGTTCATAACTGAAATACCTGATATGTCTCAATCTGATGAAACTTGA 1125 0.368 MIGSVDQGISRIKHRLSHKKVLLVLDDVDEVEQLEKLAGGCDCFGFGSKVIITTRNKQLLVAHDVEKTYEMIKLNEYDSGELFCWHAFQMNQPPLTYQDMSSRALSYAQGLPLALKVIGSNLANKNLEEWKSILEQYERIPERTIHELLKISYNCLQAGAKRIFLDIACFVNKEMMGSTKEIVEACDFGARFYLEVLVDKSLITSVPGDDDFFMHDLIRQMGREIVRQEAPLNPEKRSRLWYYEDVLKVLSENLGCNNIEGIMLDPPQQEKVKWSGMAFEKMNNLRILVARNVQFSTGPAYLPNSLRWLEWEGYPSATLPKDFSPSELIFLKLPGSSFRLREPSKIFTSYVTHLEFSFCEFITEIPDMSQSDET 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5041g00012 374 Pfam NB-ARC domain 10 143 IPR002182 GO:0043531
Pral5041g00012 374 SUPERFAMILY "Winged helix" DNA-binding domain 144 250 IPR036390 -
Pral5041g00012 374 PRINTS Disease resistance protein signature 108 122 - -
Pral5041g00012 374 PRINTS Disease resistance protein signature 15 29 - -
Pral5041g00012 374 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 370 IPR044974 GO:0006952
Pral5041g00012 374 Coils Coil 120 140 - -
Pral5041g00012 374 Gene3D - 2 73 IPR027417 -
Pral5041g00012 374 SUPERFAMILY L domain-like 263 369 - -
Pral5041g00012 374 Gene3D - 74 157 IPR042197 -
Pral5041g00012 374 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 167 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5041g00012 Pral-Chr5041 56343 58217 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5041g00012 6 371 WRKY Transcription Factor Family AT4G12020 31.675 3.67e-47 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5041g00012 - - pcin:129286217 509.99