Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5041g00011 ATGGCTATTCAAGTTTCATCCCATAGCTTCACCGGGAATCAATGCCTTCATGATGACAAGAGGCTTGGTAAAGGGGAAGAGATCTCACCTACGCTTCTTAGAGCCATTGAGAGATCAAGAATTTCCATTATTGTGTTCTCTAAGAACTATGCTACTTCCACATGGTGCCTAGAGGAACTCGCCCATATCATTTGGTGTCAGAAGCAGAAGAACCAGCTGGTTATGCCCATCTTTTACAAGGTGGATCCGTTGGATGTTCAGTATCAGAGAAATAGCTTTGAAACAGCCATGGCTGCTCTTGAAGATAGGTTCAGAGATGACTTGGGGAAAGCGCGGAAATGGAGGTTTGCTTTGTCTGAAGCAGCTTCTTTGTCAAAGGCCTGGATTTTTGAAGATGGGTACGAAATTAGGTTTATGGAAATGATTGTTAATGATGCATATGCTATGCTGCCTCCGAAAAAATTACATAACATTGGGTACATGGTTGGACTTGAGCCTCGAGTGGAAGAAGTGATCTCACTTTTGAATCAATCCGATGAGAGAGTTTGTATGTTGGGGATTCATGGAATTGGTGGACTTGGCAAAACAACCCTTGCAAAATCAGTCTATAATTCAATCTTCTACCAATTTGAGGGTGCATGTTTTTTATTTGATGTTCAAGAAGCATCAAAGAAATATCTAGGCATGGTTCGCCTCTAA 699 0.4163 MAIQVSSHSFTGNQCLHDDKRLGKGEEISPTLLRAIERSRISIIVFSKNYATSTWCLEELAHIIWCQKQKNQLVMPIFYKVDPLDVQYQRNSFETAMAALEDRFRDDLGKARKWRFALSEAASLSKAWIFEDGYEIRFMEMIVNDAYAMLPPKKLHNIGYMVGLEPRVEEVISLLNQSDERVCMLGIHGIGGLGKTTLAKSVYNSIFYQFEGACFLFDVQEASKKYLGMVRL 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5041g00011 232 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 124 IPR035897 -
Pral5041g00011 232 SMART till_3 2 124 IPR000157 GO:0007165
Pral5041g00011 232 ProSiteProfiles TIR domain profile. 1 150 IPR000157 GO:0007165
Pral5041g00011 232 Pfam NB-ARC domain 166 212 IPR002182 GO:0043531
Pral5041g00011 232 Gene3D - 7 152 IPR035897 -
Pral5041g00011 232 Gene3D - 153 231 IPR027417 -
Pral5041g00011 232 Pfam TIR domain 15 130 IPR000157 GO:0007165
Pral5041g00011 232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 224 IPR027417 -
Pral5041g00011 232 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 226 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5041g00011 Pral-Chr5041 54200 56453 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5041g00011 35 221 WRKY Transcription Factor Family AT4G12020 30.481 2.90e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5041g00011 - - pcin:129296950 346.28