LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5041g00007	ATGGCCATTCAAGTTTCATCCCATAGCTTCACCGGCAAACGCAAATACAGATTTGATGTTTTTTTGAGTTTCAGAGGCGAAGATACTCGCCACACCTTCACTGTGCCTCTCTACAATGCTTTGCGGCGTAAGGGAATCAATGCCTTCATTGACGACAAGAGGCTTGGAAAAGGGGAAGAGATCTCACCCACGCTACTTAAAGCAATTGAGAGATCAAGAATTTCCATTATTGTGTTCTCTAAGAACTATGCTACTTCAACATGGTGCCTAGAGGAACTCGCTCATATCATTTGGTGTCAGAAGCAGAACAAACAGCTGGTTATGCCAGTCTTTTACAAGGTGGATCCCATAGATGTTCAATATCAGAGAAATAGCTTTGAAACAGCCATGGCTGCTTATGAAGATAGGTTCGGAGATGACCCAGAGAAAGTGCAGAAATGGAGGTTTGCTTTGTCTGAAGCAGCTTCTCTGTCAAAAGCCTGGCTTTTTGAAGATGGCTATGAATTTGGGTTTATTGAAAGGATTGTTAAAGATGCATATGCTATGTTGCCTCCTAAACGCTTACATAGTCCTGGGTACATGGTTGGACTTGAGCCTCGCGTGGAAGAAGTGATTTCACTTTTAAATCAATCCAATGACAGAGTTTGCATGTTGGGCATTCATGGAACTGGTGGAATTGGCAAAACAACACTTGCAAAAGCTGTCTATAATTCAATGTTTTACCAATTTGAAGGTGCATGTTTTTTGTTTGATGTCAAAGAAGCAACAAAGAAATACCAGGGCATCGTTCGCCTCCAACAGAAACTTCTATCAGAGATTCTTGGGGAGAAGATTATGATGATTGGGAGTGTTGATAAAGGAATGTCAAGAATAAAACATAGACTTTCTCACAAAAGGGTTCTTTTGGTTCTTGATGATGTTGATGAGGTTGAACAGTTAGAACAACTTGCGGGAGGATGCGATTGGTTTGGTTTTGGAAGCAAAGTTATTGTAACAACAAGAAATAAGCAAATGCTAGTTATACACAATATTGGAAAAATATATGAAATGATGAAGCTGAATGAGTATGACTCTTGTGAGCTCTTTTGTTGGCATGCCTTCCAAATGAACCAACCTCCAATAACCTATCAAGATATGTCTAGTCGTGCAATGAGTTATGCACAAGGCCTTCCTCTTGCATTAAAAGTAATAGGCTCCAATTTGGCAGATAAAAATTTAGAGGAATGGAAGTTTATGATGGAACAATATGAAAGGATCCCAGAAAGAACAATTCATGAGCTTCCAAAGATAAGCTATAATTTCTTACAAGCTGGTGCTAAGCATATTTTCCTAGATATTGCTTGTTTTATTAACAACGAGATGATGAGATCTATTAAAGAAATTGTAGAAGCTTGTGATTTTGGTGCTAGGTTTTATCTTGAAGTTCTTGTCGACAAATCACTGATAACTTTAGTTGATGGTGGTAATTTTTTTTTCATGCATGATCTAATACGATAG	1497	0.3854	MAIQVSSHSFTGKRKYRFDVFLSFRGEDTRHTFTVPLYNALRRKGINAFIDDKRLGKGEEISPTLLKAIERSRISIIVFSKNYATSTWCLEELAHIIWCQKQNKQLVMPVFYKVDPIDVQYQRNSFETAMAAYEDRFGDDPEKVQKWRFALSEAASLSKAWLFEDGYEFGFIERIVKDAYAMLPPKRLHSPGYMVGLEPRVEEVISLLNQSNDRVCMLGIHGTGGIGKTTLAKAVYNSMFYQFEGACFLFDVKEATKKYQGIVRLQQKLLSEILGEKIMMIGSVDKGMSRIKHRLSHKRVLLVLDDVDEVEQLEQLAGGCDWFGFGSKVIVTTRNKQMLVIHNIGKIYEMMKLNEYDSCELFCWHAFQMNQPPITYQDMSSRAMSYAQGLPLALKVIGSNLADKNLEEWKFMMEQYERIPERTIHELPKISYNFLQAGAKHIFLDIACFINNEMMRSIKEIVEACDFGARFYLEVLVDKSLITLVDGGNFFFMHDLIR	498

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5041g00007	498	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	187	446	IPR027417	-
	Pral5041g00007	498	Gene3D	-	187	344	IPR027417	-
	Pral5041g00007	498	Gene3D	-	352	436	IPR042197	-
	Pral5041g00007	498	Pfam	TIR domain	18	163	IPR000157	GO:0007165
	Pral5041g00007	498	PRINTS	Disease resistance protein signature	217	232	-	-
	Pral5041g00007	498	PRINTS	Disease resistance protein signature	294	308	-	-
	Pral5041g00007	498	PRINTS	Disease resistance protein signature	387	401	-	-
	Pral5041g00007	498	Gene3D	-	12	186	IPR035897	-
	Pral5041g00007	498	SMART	till_3	17	157	IPR000157	GO:0007165
	Pral5041g00007	498	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	19	498	IPR044974	GO:0006952
	Pral5041g00007	498	Pfam	NB-ARC domain	199	418	IPR002182	GO:0043531
	Pral5041g00007	498	ProSiteProfiles	TIR domain profile.	16	183	IPR000157	GO:0007165
	Pral5041g00007	498	FunFam	Disease resistance protein (TIR-NBS-LRR class)	14	184	-	-
	Pral5041g00007	498	SUPERFAMILY	Toll/Interleukin receptor TIR domain	12	157	IPR035897	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5041g00007	Pral-Chr5041	45910	48395	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5041g00007	18	484	WRKY Transcription Factor Family	AT4G12020	29.724	1.33e-46	172

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5041g00007	-		-	pcin:129286217	702.59