Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5041g00003 ATGGCGATTCAAGTGGCCTCACCATCATCCCGTAGCTTCACCAGCGAAGCTAAGTATCGATATGATGTCTTTCTGAGTTTCAGAGGTGAAGATACTCGCCACATCTTCACTGCGCCTCTCTACGATGCTTTGCGCCGTAAGGGAATCAACGCCTTCATTGATGACGAGAAGCTTGGGAAAGGGGAAGAGATTTCACCTACGCTTCTTAGAGCCATTGATAGATCAAGAGTTTCCATTATTGTGTTCTCTAGAAACTATGCTACCTCCACATGGTGCCTAGAGGAACTCGGCCATATCATTTGGTGTCAAAAGCAGAAGAACCAGCTGGTTATGCCCATCTTTTACAAGGTGGATCCGATGGATGTTCAGTATCAGAGAAACAGTTTTGAGGAAGCCATGGCTGCTCTTGAAGAAAGGTTTAGAGATGACTTGGAGAAAGTACAACGATGGAGATCTGCTTTGTTTGAAGCTGCTAGCTTATCATCGGCATGGCTTTTCGAAGATGGATACCAAGATGGATTTATTGAAAGTATCGTTGAAGATACATTTGCTAGGCTACCTCCTAAACGCTACCATAACGTTGATTACATCGTTGGACTTGAGCCTTATATAGAAGAAGTGATGTCACTTTTGGATGAAACTGATGGCAGAGTTTGTGTGTTGGGAATTTATGGAATTGGTGGGATTGGCAAAACAACCCTTGCAAAAGCTGTCTATAATTCAATCTTCTACAATTTTGAAGGTGCTTGTTTTTTGTTTGATGTTAGAGAAACATCAAAGAAATATCAAGGTGTTATTCACCTTCAACAAATGCTACTATCAGAAATTCTAGATGATAAGATCAAGTTTAGCAGTGCTGATGAAGGAATAACAAAAATAAAACATAGACTCTCTCACAAAAAGATTTTGTTGGTTCTTGATGACGTCGAAGAAGCTGAACAGTTAGAACAGCTTGCTGGAGGGTGTGATTGGTTTGGTTGTGGAAGCAAGATCATTATAACAACAAGAAACAAGCAATTGCTAATTGCACGCGATATTAAGAAGCAATATGAAATGAAAGAGCTAAATGAGCATTACGCTCTTGAGCTCTTTTGTTGGCATGCATTTCGTACAAGCCACCCTCCAAAAGTATACAAAAGTATGTCCATTGGTATTATACGTTATATACGTGGCCTTCCTTTGGCTTTAAAATTGATAGGCTCCAATTTGGCTCGCAAAAACTTGGAGGAATGGAGATATACATTGAAACAATATTATCAAATCTCAAGAGGAACAATACATGAGATATTGAAAATAAGCTATGATTGCTTACAAGATGATGCTAAGTGTATTTTCTTGGACATTGCTTGTTTCTTTAAAAAGGAGACATTGGAATTTGTAGAAGACATACTCGGAGCTTGTTACCATGGGACAAGGTTTTTTATTGAGGTTCTTGTAGATAAATCTTTGATAACTATTGCTGATAATGGTCTTTTGCTGATGCATGATCTAATACAACAAATGGCTAAAGAAATTGTTGAGCAAGAGGCACCCTCAAATCCTAGTAAACGTAGCAGGTTATGGTATTACAAAGATGTGCTTAATGTGCTGCAAAATAATTTAGGAGGAAATGATATTGAAGGAATAATACTTGATCCACCTAAACAAGAAGAAGTGATGTGGAACGGCTTGGCTTTTGAGAAGATGAATAATCTTCGAATTCTGATTGTTCGAAATACCCAATTCTTTACAAGTCCCAAGTATCTTCCTAATAGTTTGAGATTGCTTGATTGGGAGGGATATCCTTCTATGACTTTACCACCAGATTTTTCTCCTCCAAAACTAGTTTGCTTCAAGTTATGTAGAAGTCTTTTCAAATTTGAAGAGCCATTCCAGAAGTTTGGATATGTGACACACATGAATTTCTCGCGGTGTGAATTCATAACAGAAGTACCTGATATGTCTCATTTTCAAAATTTAAAAACATTAAGCTTTCATGAATGTCGCAATTTGATCAAAGTTCATGATTCAGTGGGACTTCTTGGTAAGATTATCAAATTAGATGTTGGTAAATGCACCAAACTTAGCAGCTTTCCACGTGAAATCAACATGCCGTCTCTTGAAGTGCTCGTTCTTACTAACTGCAAGAGCCTTGAGTGCTTCCCTAATTTAGTTGGAAAGATGGATGCACTTGGAAGTATTTTTGCAGAAGGTAGCGCTATTAAAGAGCTTCCAAACAGCTTATTCACGTTGCAAAATCTTAGCACACTCATGTTGGGAGGACTTCAGCCTCATGGTAGAAAATGTTTGAAGAAATTACTGCAAGAAAGCCAACCACTTATCAGT 2325 0.3832 MAIQVASPSSRSFTSEAKYRYDVFLSFRGEDTRHIFTAPLYDALRRKGINAFIDDEKLGKGEEISPTLLRAIDRSRVSIIVFSRNYATSTWCLEELGHIIWCQKQKNQLVMPIFYKVDPMDVQYQRNSFEEAMAALEERFRDDLEKVQRWRSALFEAASLSSAWLFEDGYQDGFIESIVEDTFARLPPKRYHNVDYIVGLEPYIEEVMSLLDETDGRVCVLGIYGIGGIGKTTLAKAVYNSIFYNFEGACFLFDVRETSKKYQGVIHLQQMLLSEILDDKIKFSSADEGITKIKHRLSHKKILLVLDDVEEAEQLEQLAGGCDWFGCGSKIIITTRNKQLLIARDIKKQYEMKELNEHYALELFCWHAFRTSHPPKVYKSMSIGIIRYIRGLPLALKLIGSNLARKNLEEWRYTLKQYYQISRGTIHEILKISYDCLQDDAKCIFLDIACFFKKETLEFVEDILGACYHGTRFFIEVLVDKSLITIADNGLLLMHDLIQQMAKEIVEQEAPSNPSKRSRLWYYKDVLNVLQNNLGGNDIEGIILDPPKQEEVMWNGLAFEKMNNLRILIVRNTQFFTSPKYLPNSLRLLDWEGYPSMTLPPDFSPPKLVCFKLCRSLFKFEEPFQKFGYVTHMNFSRCEFITEVPDMSHFQNLKTLSFHECRNLIKVHDSVGLLGKIIKLDVGKCTKLSSFPREINMPSLEVLVLTNCKSLECFPNLVGKMDALGSIFAEGSAIKELPNSLFTLQNLSTLMLGGLQPHGRKCLKKLLQESQPLIS 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5041g00003 775 Gene3D Ribonuclease Inhibitor 528 729 IPR032675 -
Pral5041g00003 775 SUPERFAMILY "Winged helix" DNA-binding domain 425 530 IPR036390 -
Pral5041g00003 775 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 448 IPR027417 -
Pral5041g00003 775 Gene3D - 15 188 IPR035897 -
Pral5041g00003 775 Gene3D - 189 350 IPR027417 -
Pral5041g00003 775 PRINTS Disease resistance protein signature 220 235 - -
Pral5041g00003 775 PRINTS Disease resistance protein signature 695 711 - -
Pral5041g00003 775 PRINTS Disease resistance protein signature 296 310 - -
Pral5041g00003 775 PRINTS Disease resistance protein signature 389 403 - -
Pral5041g00003 775 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 730 IPR044974 GO:0006952
Pral5041g00003 775 SUPERFAMILY L domain-like 508 755 - -
Pral5041g00003 775 Pfam NB-ARC domain 203 435 IPR002182 GO:0043531
Pral5041g00003 775 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 187 - -
Pral5041g00003 775 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 160 IPR035897 -
Pral5041g00003 775 SMART till_3 20 160 IPR000157 GO:0007165
Pral5041g00003 775 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Pral5041g00003 775 Gene3D - 354 438 IPR042197 -
Pral5041g00003 775 Pfam TIR domain 21 166 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5041g00003 Pral-Chr5041 25194 28328 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5041g00003 21 752 WRKY Transcription Factor Family AT4G12020 30.544 1.69e-81 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5041g00003 - - pcin:129284776 1113.6