Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5041g00001 TACGACGAAGGTGAATTTATTGAAGGTATTGCTGAAGATGCATACGCTAGGCTGCCTCCTAAACGCTTCCATAACGATGATTACATCGTTGGACTTGAGCCCCGTATAGAAGAAGTCATGTCACTTTTGAATGAGTCTGATAACAGTGTTTCTATGTTGGGGATTCATGGAGCTGGTGGAATTGGTAAAACAACCCTTGCAAAAGCCATCTATAACTCAATCTTCTTCTATTTTGAAGGTGCTTGTTTTTTATTTGATGTCAGAGAAGTGTCAAAGAAATATCAGGGTGTTGTCCGCCTTCAACAAACACTTCTATCAGAAGTTCTTGAGGAAAAGAAGATGAAGTTTGGTAGTGTTGATGAAGGAATATCAAAAATAAAGCATAGACTCTCTCACAAAAAGATTTTGTTGATTCTTGATGACGTTGAAGAAGTTGAGCAGTTAGAACAACTTGCAGGAGGGGCTGATTGGTTTGGTTGTGGAAGCAAGATCATCATAACAACAAGAAACAAGCAATTGCTAGTTGCACACGATCTTAAAAAAACATATGAAATGAAACAGCTGAATGAGCATGACTCTCTTAAACTGTTTTGTTGGCATGCCTTTCGAATGAGCCACCCTCCAAAAGCTACAAAAGAGAATTTGGAATATGTTGAAGACATACTAGGAGCTTGTTATTATGGGACAAGGTTTTATATTGAAGTTCTTGTTGATAAATCTCTAATAACTGTTGCTGATAATGGTCGCTTGCACATGCATGATCTAATTCAACAAATGGCTAGAGAGATTGTTAAGCAAGAGGCACCCTCCAGTCTTGGTAAACGTAGCAGGTTATGGTATTACAAAGATGTGCTTAATGGAGGAAATGATATTGAAGGGATAATCCTTGATCCACCTAAACAAGAAGAAGTGATATGGAATGGTTTGGCCTTTCAGAAGATGAAAAATCTTCAAATTCTCATTGTTCGAAATACCCAATTCTTAACAAGTCCCAAGTATCTTCCTAATAGTTTGATATTGCTTGATTGGGAGAGATATCCTTCTATGACTTTACCACCAGATTTTTCTCCTCCAAAACTAGTTTGCTTCAAGTTATATAGAAGTCTTTTCAAATTGGAAGAGCCATTCCAGAAGTATGAATATGTGACATATATGAATTTCTCGCAATGTGAATTCTTGAGAGAAGTGCCTGATATGTCTCATTTTCGAAATTTAAAAACATTGAGCTTTCGCGAATGTTGCAATCTGATCAAAGTTCATGATTCTGTGGGATCTCTTCATAAGCTAATACTATTAGATGTTGGTGAATGTACCAAACTTAAAAGCTTTCCATGTGAAATCAACATGCCATGTCTTGAAGATCTCACTCTTTCTGGCTGCAAGAGTCTTAACTACTTGCCACGTATCGTCGGAAAGATGGATGCACTTACCGGTATTTCTGCAGATAGGACTGCTATTAAAGAGCTCCCACCTTCCATTGGAAATCTTTCAGGGCTTGATACTTTGTTTATACACTCTTGCAAAAGTCTTAGGGAGCTTCCGACCAGCTTATTGATGTTGCAAAATCTTAGCACACTTTGTTGGGAGGCATTCAACCTCGTGGTAGAAAATCTTTAA 1617 0.3779 YDEGEFIEGIAEDAYARLPPKRFHNDDYIVGLEPRIEEVMSLLNESDNSVSMLGIHGAGGIGKTTLAKAIYNSIFFYFEGACFLFDVREVSKKYQGVVRLQQTLLSEVLEEKKMKFGSVDEGISKIKHRLSHKKILLILDDVEEVEQLEQLAGGADWFGCGSKIIITTRNKQLLVAHDLKKTYEMKQLNEHDSLKLFCWHAFRMSHPPKATKENLEYVEDILGACYYGTRFYIEVLVDKSLITVADNGRLHMHDLIQQMAREIVKQEAPSSLGKRSRLWYYKDVLNGGNDIEGIILDPPKQEEVIWNGLAFQKMKNLQILIVRNTQFLTSPKYLPNSLILLDWERYPSMTLPPDFSPPKLVCFKLYRSLFKLEEPFQKYEYVTYMNFSQCEFLREVPDMSHFRNLKTLSFRECCNLIKVHDSVGSLHKLILLDVGECTKLKSFPCEINMPCLEDLTLSGCKSLNYLPRIVGKMDALTGISADRTAIKELPPSIGNLSGLDTLFIHSCKSLRELPTSLLMLQNLSTLCWEAFNLVVENL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5041g00001 538 SUPERFAMILY L domain-like 266 530 - -
Pral5041g00001 538 Gene3D Ribonuclease Inhibitor 285 536 IPR032675 -
Pral5041g00001 538 PRINTS Disease resistance protein signature 447 463 - -
Pral5041g00001 538 PRINTS Disease resistance protein signature 52 67 - -
Pral5041g00001 538 PRINTS Disease resistance protein signature 129 143 - -
Pral5041g00001 538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 219 IPR027417 -
Pral5041g00001 538 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 218 IPR044974 GO:0006952
Pral5041g00001 538 Gene3D - 17 183 IPR027417 -
Pral5041g00001 538 Pfam NB-ARC domain 35 211 IPR002182 GO:0043531
Pral5041g00001 538 SUPERFAMILY "Winged helix" DNA-binding domain 218 285 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5041g00001 Pral-Chr5041 237 2470 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5041g00001 221 526 WRKY Transcription Factor Family AT4G12020 33.435 2.40e-35 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5041g00001 - - pcin:129284776 456.832