Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5039g00036 ATGAGGTTAGATCTCAAGATAAGCTATGATTGCTTACAAGATGGTGCTAAGCGTGTTTTCCTAGACATTGCTTGTTTCTTTAAAAGGAAGACATTAGAATTCATTGAAGACATACTAGAAGCCTGTGATGATGGAGCAAGGTTTTACATCGAAATTCTTGTTGATAAATTCTTCATAACTAATGATGAAGTTAACAAACGCTTGTACATGCATGATCTAATACAACAAATGGCGAAAGAGATTGGAAACGATAATATTGAAGGAATAATACTTGATCCACCATATCAAGAAGAAGTGGTGTGGGATGGTATAGCTTTTGAGAAGATGAATAATCTCAAGATTCTCATCATTCGAAATACTCAGTTTTTAGCCAGTCCTAAGTATTTTCCAAAGAGTTTAAGATTACTAGATTGGAAAGGATTTCCTTCAACCACTTTACCACCGGCATTTTCACCTTCGAAACTAATCTGCTTGAAGTTATATGGAAGCCATTTCAGATTAGAAAAGCCATTCAAGTTATCATTCAAGTGTAACTTCATCGATTTCTTGGTATTTGGCCCATTAGACTGGATCTCTCATGATCATAGGGTGCAAGCCAAGGTAGCAGGCACTAGGTTATCCCTTCATAATACTGTTTAA 639 0.3584 MRLDLKISYDCLQDGAKRVFLDIACFFKRKTLEFIEDILEACDDGARFYIEILVDKFFITNDEVNKRLYMHDLIQQMAKEIGNDNIEGIILDPPYQEEVVWDGIAFEKMNNLKILIIRNTQFLASPKYFPKSLRLLDWKGFPSTTLPPAFSPSKLICLKLYGSHFRLEKPFKLSFKCNFIDFLVFGPLDWISHDHRVQAKVAGTRLSLHNTV 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5039g00036 212 SUPERFAMILY "Winged helix" DNA-binding domain 5 82 IPR036390 -
Pral5039g00036 212 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 167 IPR044974 GO:0006952
Pral5039g00036 212 SUPERFAMILY L domain-like 67 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5039g00036 Pral-Chr5039 311541 313882 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5039g00036 5 166 WRKY Transcription Factor Family AT5G45050 27.778 1.17e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5039g00036 - - pcin:129286213 271.166