Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5039g00034 ATGGTTGGACTTGAGCCTCGTTTAGAAGAAGTGATGTCACTTCTGGGTGAAAGTGATCGTAGCGTTTGTATGTTGGGGATTCATGGAACTGGTGGGATTGGCAAAACAACCCTTGCAAAAGCTTTGTATAATAAAATCTTCCATCAATTTGAAGGTGCATGTTTTTTGTTTGACGTCAGAGAAGCATCAATGAAATATCATGGCATTGTTCGTCTTCAGCAAACACTTTTATCAGAGATTCTTGAGGAAAAGAGGATGAAGTTTAACAGTGTCGATGAAGGAATATCTATTCTAAGACATAGACTCTCACATAAAAATGTTTTGTTGGTTCTTGATAATGCTGATCAACTTGATCAACTAGAGCAACTTGCAGGAGAGTGTGATTGGTTTGGTTGCGGAAGCAAGGTCATCATAACAACAAGAAACAAGCAATTGCTAATTGCACGTAATGTTGAAAAGACATATGAAATGATGAAGCTAAATGATCATGACTCGCTTGAACTCTTTTGTTGGCATGCCTTCAAGTTGAGCCAACCTCCAAAAGGATATCAAGATATGTCAAATTGTGCGAGCAGATATGCACAAGGCCTTCCTCTGGCTTTAAAATTGATAGGCTCCAATTTGGCACACAGAAACTTAGAAGAATGGAGGTCTACATTGGAACAATATGAGAGGATCCCGGAAAGAACAATTCATGAGATACTAAAGATGAGCTATGATTGCTTACCGGACAATGCTAAGCGTATTTTCCTAGATATTGCATGTTTTTTTAAGGCAACGATATTTGTACGCATTGAAGACATGGTAGAAGCTTGTGATTTTGGAAGGTTTTATTTTGAAGTGCTCGTTGAAAAATCTCTTATATCTATTTCTGATAATGGTACGTTGGGCATGCATGATCTAATACAAAAAATAGGTAGAGAGATTGTTAGGCAAGAGGCACCATCAAAGCCTAATAAACGCAGTAGAATATGGTATTATAAAGATGTTCTCAAATTGCTTCGTGAAAATTTAGTAAGTATCTAG 1026 0.3733 MVGLEPRLEEVMSLLGESDRSVCMLGIHGTGGIGKTTLAKALYNKIFHQFEGACFLFDVREASMKYHGIVRLQQTLLSEILEEKRMKFNSVDEGISILRHRLSHKNVLLVLDNADQLDQLEQLAGECDWFGCGSKVIITTRNKQLLIARNVEKTYEMMKLNDHDSLELFCWHAFKLSQPPKGYQDMSNCASRYAQGLPLALKLIGSNLAHRNLEEWRSTLEQYERIPERTIHEILKMSYDCLPDNAKRIFLDIACFFKATIFVRIEDMVEACDFGRFYFEVLVEKSLISISDNGTLGMHDLIQKIGREIVRQEAPSKPNKRSRIWYYKDVLKLLRENLVSI 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5039g00034 341 PRINTS Disease resistance protein signature 194 208 - -
Pral5039g00034 341 PRINTS Disease resistance protein signature 101 115 - -
Pral5039g00034 341 PRINTS Disease resistance protein signature 24 39 - -
Pral5039g00034 341 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 329 IPR044974 GO:0006952
Pral5039g00034 341 Pfam NB-ARC domain 7 240 IPR002182 GO:0043531
Pral5039g00034 341 Gene3D - 159 243 IPR042197 -
Pral5039g00034 341 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 253 IPR027417 -
Pral5039g00034 341 Gene3D - 1 157 IPR027417 -
Pral5039g00034 341 SUPERFAMILY "Winged helix" DNA-binding domain 230 334 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5039g00034 Pral-Chr5039 292677 293702 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5039g00034 2 325 WRKY Transcription Factor Family AT5G45050 34.545 8.77e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5039g00034 - - pcin:129285870 490.73