Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5039g00032 ATGTGTGGTAAGTTATGCAAAGGGCCTTCCTCTGGCTTTAAGATTAATAGGCGCCAATTTGGCACATTAAACTTCAGGGAATGGAGGTCTATATTAGAACTATATGAGAGGATCCCGGAAAGAACACTTCTAGACATACTAAAGATAAGCTATGGTTGCTTACAAGATGGTGCTAAGGGTTTTTTTCTAGATATTGCTCGTTTCTTTAAAGAGGAGGATTTGGAATCTGTTGAAGAAAAATTAGCAGCTTACGATTTTGGTGCAAGCTTTTATGTTGAAGTTCTTGTTGACAAGTCTCTGATAACTGTTGCTGATAATGGTAACTGGGGCTTGCATAATCTAAGACAACAAATGGGTAGAGAGATTGTTAGGCAGGGGCCACCATCAAATCCTTGTAAACGCAGTAGATTATGGCATTATGAAGATGTACCTAAAGTATTGCGTGAAAATCTCGGAAGTAGTAATAATGAAGGAATAATGCTTGATCCATCTCAACAAGAAGAAGTGGAGTGGAGTAGTATGGCCTTTGAGACGATGAGTACTCTGAGGATTCTTTGTCTCATCAGAGTTCACGATTCAGTGGGACCTTTGTCTAAGCTTGTTGAATTAGATCTTAGGGAATGCAGCAGTCTTACAAGCTTTTCACGTGAAATCAAGATGGCTTCTCTTCGAAAGCTTCATCCCAGTTATTGCAGGAGTCTTGATTACTTCCCATGTATAGTGGGAAAGATGAATGCACTGAGGGCAATTTATGCTGAAGGCACTGCTATTAAAGAGCTCCCACTTTCCATTGGAAATCTTCCAAGACTTGAATCTTTAGCTATAAGCTCCCACAAAAGTATTAGGGAGCTTCCAAGCGGCTTATTCACATTGCAAAACCTTGGTTGGTTTAACCTAAGTGGGAGTGATTTTGTTTCCCTTCCTGAGTGCATCAAAGAGTGTGCTAATCTGCAGACACTAGTACTGTATAACTGCAAGAGGCTTAGAGACATACCAGAGTTGCCATGGAAATTGGCAAATATAGAGGCAGAGGATTGCACATCATTAACTACAGAGTCATTAGGCCATCTATGGGATGAAAATGAGAATTCTCCTTTTATTCTTTTATATGTTGTTTTCAAATCTGAAAATACCTTTGGCCTTGTTGTTCTGGTACATCAGGCGAGAAAGGAGTTTTCTCACTTGAACATCACTATGCCATTAACAACATTTCCTGATTGGTTCAACGAATGCTGTAAAGGAGGGACACTGTCTTTTGAGGCTCGTGGGAATTTCCCTCATGCTGCCTTTGCATTTGAGTTGGGGAAAGCAAACACCAGTTCAAAGCACTTGCTCCATGTTTCTGTGAGCGTCAATGAAGAGTGGGAGAGGCTTGATAGTTTTCTGGAACTGGATTGGAATGATGTGGAAATAGAAGTCCTATCTCTAATCCCCCGCAAGAGAAAAAAAGTGATAAAGTTAACACCAGAAATGCCTGTAGTGAGCTGTGGAGTTTATGCGTACAAACAACAAACAAACATGGAGAACGTCCGGTTCAGTTCTACTATGCCTTCCTTGAATGCTCCAAGGACTTCACTGAAGCAAAGAGCGGTTACTTCTCCTCCTAATGAACCACCCAAGAAGTCATTGGGAATGTTCAAGGTTGCTGATTACTCAATAACAAAGAAGGGGATAAGGTGA 1680 0.4083 MCGKLCKGPSSGFKINRRQFGTLNFREWRSILELYERIPERTLLDILKISYGCLQDGAKGFFLDIARFFKEEDLESVEEKLAAYDFGASFYVEVLVDKSLITVADNGNWGLHNLRQQMGREIVRQGPPSNPCKRSRLWHYEDVPKVLRENLGSSNNEGIMLDPSQQEEVEWSSMAFETMSTLRILCLIRVHDSVGPLSKLVELDLRECSSLTSFSREIKMASLRKLHPSYCRSLDYFPCIVGKMNALRAIYAEGTAIKELPLSIGNLPRLESLAISSHKSIRELPSGLFTLQNLGWFNLSGSDFVSLPECIKECANLQTLVLYNCKRLRDIPELPWKLANIEAEDCTSLTTESLGHLWDENENSPFILLYVVFKSENTFGLVVLVHQARKEFSHLNITMPLTTFPDWFNECCKGGTLSFEARGNFPHAAFAFELGKANTSSKHLLHVSVSVNEEWERLDSFLELDWNDVEIEVLSLIPRKRKKVIKLTPEMPVVSCGVYAYKQQTNMENVRFSSTMPSLNAPRTSLKQRAVTSPPNEPPKKSLGMFKVADYSITKKGIR 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5039g00032 559 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 348 IPR044974 GO:0006952
Pral5039g00032 559 Gene3D Ribonuclease Inhibitor 172 358 IPR032675 -
Pral5039g00032 559 SUPERFAMILY RNI-like 172 359 - -
Pral5039g00032 559 SUPERFAMILY "Winged helix" DNA-binding domain 43 147 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5039g00032 Pral-Chr5039 273282 276297 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5039g00032 19 349 WRKY Transcription Factor Family AT4G12020 26.108 2.85e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5039g00032 - - pcin:129286213 438.728