Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5039g00030 ATGGCTATTCAAGTTTCATCCCATAGCTTCACCGGCCAACCCAAATACAGATTTGATGTTTTTCTGAGTTTCAGAGGCGAAGATACTCGCCACTCCTTCACTGTGCCTCTCTACGATGCTTTGCGGCGTAAGGGAATCAACGCCTTCATTGACGACAAGAAGCTCGGCAAAGGCGAACGGATCGTACCTGCGCTTCTTAAAGCCATTGAGAGATCGAGGATTTCCATTATTGTCTTCTCCAGCAACTACGCTACGTCTACATGGTGCCTTGATGAACTAGCGCACATCATGTGGTGTAAGAATGAGAAGAACCAGCTGGTTATGCCTATCTTTTACAAGGTGGATCCAATGGCTGTTCAGTATCAAAAAGACAGCTTTGAAGCAGCCATGGCTGCTCATGAAGATACATTCAGAGATCACCCAGAGAAAGTGCAGAAATGGAAGTCTGCTTTGTCTGAAGCAGCTTCTTTGTCAAAGGCCTGGCTTTTTGAAGATGGATACGAAATTGGGTTTATAGAGAGGATTGTTAAAGATGCATGTGCTGTGCTGCCTCCCAAACACTTACATAGCATTGGGTACACGGTTGGACTCGAGCGTCGTGTGGAAGAAGTGATTTCACTTTTAAATCAATCCGATGAGAGAGTTTGTATGTTGGGGATCCATGGGATTGGCGGAATTGGCAAAACGACCCTTGCAAAATCCGTATATAATTCAATATTCTACCAATTTGAGGGTGCATGCTTTTTGTCTGATGTCAAAGAAGCATCAAAAAAATACCAAGGCATAGTTTGTCTACAACAGAAACTTCTATCAGAGATTCTTGAGGAGAAGATTATGAAGATTGGGAGTGTTGATAAAGGAATATCAAGAATAAAACATAGGCTTTCTAAGAAGAAGGTTCTATTGGTCCTTGATGATGTTGATGAGGCTGAACAGTTAGAACAACTTGCAGGGCAGTGTGATTGGTTTGGCTGTGAAAGCAGAGTCATTATAACAACAAGAAATAAGCAAGTGCTAATTGCACGTAATGTTGAAAAAACATATGAAATGATCAAGCTGAATGAGTATGACTCTTGTGAGCTCTTTTGTTGGTATGCCTTCCATATGAACCAACCTCCGAAAACCTATCAAGAAATGTTTAGTTGTGTGATAAGTTATGCACAGGGCCTTCCTTTAGCATTAAGAGTAATAGGCTCCAATTTGGCAAATAAAAACTTAGAGGAATGGAGTTCTATATTGGAACAATATGAGGGGATCCAGGAAAGAACAATTCATGATATCCTAAAGATAAGCTATGATTGCTTACAAGCTGGTGCTAAGCGTATTTTCCTGGATATTGCTTGTTTTACGGATAAGGAGATGTTGGGATCTATTAAAGATATTGCTCGTTTTACTAATAAGGAGGTGTTGGGATCTATTAAAGAAAGCATACAAGCCTGCGATTTTGGTGATAGGTTTTGTCTTGAAGTTCTTGTTGATAAATCTTTGATAACTTTAGCTGCTGCTGGTGATTATATTATCATGCATGATCTAATACGACAAATGGGAAGAGAGATCGTAAGACAAGAGGCACCATTAAATCCTGAAAAGCGTAGCAGGCTATGGTATTACGAAGATGTTCTTAAAGGATGCAATAATAATGAAGGAATAATGCTTGATCCTCCTCATCAAAAGAAAGTAAAGTGGAGTGGTATGGCATTTGAGAAGATGAATAATCTTAGAATTCTTGTTGTTCGAAATGTCCAATTTTCAACCGCCCCTGCCTATCTTCCCAACAGTTTAAGATGGCTTGAATGGGAGGGATATCCTTCTACAACTTTGCCAAGAGATTTTTCTCCGTCGGAACTAATGTGTTTGAAGCTAACTAAAAGTCCTTTTAGACTAAAAGGGCCATTAAAGATTTTTACCAGCCATGTGACACAATTGGATTTTTCATTTTGTGAATTCATAACTGAATTACCTGATATGTCTCAATGTCAATGTTTACGAAGACTGGATTTACGATACTGTGACAATCTGATAAAAGTTCATGATTCGTTGGGATCCCTCTCTAAGCTGATCAAAGTAGACTTTAGAGGATGCACCAAACTTTCCATTTTTCCGCGTGAAATCAAGATGGCATCACTAAAAACGCTTTTTCTTGAAGGATGCACGAGTCTTGAGCACTTCCCACATGTAGTGGGAAAGATGGATGCACTAGACTTCATTTCAATAGAGGGCACTGCTATTAAGGAGCTCCCACCTTCAATTGGGAATCTCTCAGGTCTTCAAGAGTTATTTATGCGCAGCTGCTATGGTCTTAGAGAACTTCCAACCAGCTTATTCATGTTGCCAAATCTTGAGACGTTTGGTTTAGATAGCCCTCATCCTTATTACGGCAGAAAGTATTGGATGAAGTTAATGCAAGATATCCAACCAATTATCAGCAGCTGTTATATGAAGAGTTTGAGTCTCGAGGATTTGGGGCTGTTGGATGAAGATCTTCACCTAATTCTGAATAATTTTCGAAACTTGGGACAGTTAGATCTATCAAGGAATGATTTCGTCTCTCTCCCTAAATGCATTAAGGAGTGTACGAATCTATGGAGGCTAGCAGTGAATGATTGCAAGAGGCTAAGAGACATACCAGAGTTGCCATCAAAATCGTATATGATAGAAGCACGGAATTGCACATCATTAACTGCAGAATCATTGGACAACTTATATTCTCAGGCCAAAAAGGAGTTAATTATGTTGAGGATGAGTCTGCCGGCGGTAACAACATTTCCTGATTGGTTCCACTGTTGGAGTGAAGGAGGCACGTTGTCTTTTCGCGTTCGTGGGAATTTTCCTTCTTTTCTTCTTGCATTTGAGCTTGCGGGGAAAGCGAACATGAGTAGGAAACAGGACTTCCCCATTTTTATCAATGGCGGATTTTTCCAGTTCAGGGAAGAAGAGAGAAAGCGCCTCAACAACTTTATAGGGTCTGATTGGAATGACGTGGAAATACAACCTATGACTGACTCACCGGGTACATCCGTAGTTAAGTGTGGAGTTTATTTCTACAAGGAAACAAACATGGAGAATGTGCAGTTCAAGTCTTCTCATGCTTCAACAGCATCACTGAAACAAAGAGCGATGATTTCTCTTCCTAATTTTGAACCACCCAAGAAGCTCCTGAGAACTGATCAAAAAAGGAAAACTCAGTAA 3189 0.4026 MAIQVSSHSFTGQPKYRFDVFLSFRGEDTRHSFTVPLYDALRRKGINAFIDDKKLGKGERIVPALLKAIERSRISIIVFSSNYATSTWCLDELAHIMWCKNEKNQLVMPIFYKVDPMAVQYQKDSFEAAMAAHEDTFRDHPEKVQKWKSALSEAASLSKAWLFEDGYEIGFIERIVKDACAVLPPKHLHSIGYTVGLERRVEEVISLLNQSDERVCMLGIHGIGGIGKTTLAKSVYNSIFYQFEGACFLSDVKEASKKYQGIVCLQQKLLSEILEEKIMKIGSVDKGISRIKHRLSKKKVLLVLDDVDEAEQLEQLAGQCDWFGCESRVIITTRNKQVLIARNVEKTYEMIKLNEYDSCELFCWYAFHMNQPPKTYQEMFSCVISYAQGLPLALRVIGSNLANKNLEEWSSILEQYEGIQERTIHDILKISYDCLQAGAKRIFLDIACFTDKEMLGSIKDIARFTNKEVLGSIKESIQACDFGDRFCLEVLVDKSLITLAAAGDYIIMHDLIRQMGREIVRQEAPLNPEKRSRLWYYEDVLKGCNNNEGIMLDPPHQKKVKWSGMAFEKMNNLRILVVRNVQFSTAPAYLPNSLRWLEWEGYPSTTLPRDFSPSELMCLKLTKSPFRLKGPLKIFTSHVTQLDFSFCEFITELPDMSQCQCLRRLDLRYCDNLIKVHDSLGSLSKLIKVDFRGCTKLSIFPREIKMASLKTLFLEGCTSLEHFPHVVGKMDALDFISIEGTAIKELPPSIGNLSGLQELFMRSCYGLRELPTSLFMLPNLETFGLDSPHPYYGRKYWMKLMQDIQPIISSCYMKSLSLEDLGLLDEDLHLILNNFRNLGQLDLSRNDFVSLPKCIKECTNLWRLAVNDCKRLRDIPELPSKSYMIEARNCTSLTAESLDNLYSQAKKELIMLRMSLPAVTTFPDWFHCWSEGGTLSFRVRGNFPSFLLAFELAGKANMSRKQDFPIFINGGFFQFREEERKRLNNFIGSDWNDVEIQPMTDSPGTSVVKCGVYFYKETNMENVQFKSSHASTASLKQRAMISLPNFEPPKKLLRTDQKRKTQ 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5039g00030 1062 Pfam TIR domain 18 161 IPR000157 GO:0007165
Pral5039g00030 1062 Gene3D Ribonuclease Inhibitor 544 721 IPR032675 -
Pral5039g00030 1062 ProSiteProfiles TIR domain profile. 16 183 IPR000157 GO:0007165
Pral5039g00030 1062 Gene3D - 187 351 IPR027417 -
Pral5039g00030 1062 Pfam NB-ARC domain 198 428 IPR002182 GO:0043531
Pral5039g00030 1062 Gene3D - 12 186 IPR035897 -
Pral5039g00030 1062 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 811 IPR044974 GO:0006952
Pral5039g00030 1062 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 446 IPR027417 -
Pral5039g00030 1062 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 157 IPR035897 -
Pral5039g00030 1062 SMART till_3 17 157 IPR000157 GO:0007165
Pral5039g00030 1062 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Pral5039g00030 1062 PRINTS Disease resistance protein signature 704 720 - -
Pral5039g00030 1062 PRINTS Disease resistance protein signature 217 232 - -
Pral5039g00030 1062 PRINTS Disease resistance protein signature 294 308 - -
Pral5039g00030 1062 PRINTS Disease resistance protein signature 387 401 - -
Pral5039g00030 1062 Gene3D Ribonuclease Inhibitor 722 937 IPR032675 -
Pral5039g00030 1062 Gene3D - 352 436 IPR042197 -
Pral5039g00030 1062 SUPERFAMILY L domain-like 508 901 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5039g00030 Pral-Chr5039 259136 266573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5039g00030 12 785 WRKY Transcription Factor Family AT4G12020 30.112 2.53e-82 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5039g00030 - - pcin:129286217 1136.71