Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5039g00029 ATGATGATGTCACTTTTGGATCATTCTAATGATGGCATTTGTAAGTTGGGGATTTATGGAACTGGTGGAGTTGGAAAAGCAACCCTTGCGAAGGCTTTGTATAATTCAATCTTCTACCAATTTGAAGGCGCATGTTTTTTGTTTGATGTTAGAGAAGCGTCAAAGAAATACCAGGGCATTTTTCATCTTCAGCAAACATTATTAGCAGAGATTCTTGAGGAAAAGAAGACAAAGTTTGGCAGTGTTGATGAAGGAATATCTAGAATAAAACACCGGATCTCTCACAAAAGAGTCCTATTGGTTCTTGATGATGTTGATGAGGTTGAACGGTTGGAAAAACTAGCAGATATTGCTTGTTTCTTTAAAGAGGAGGATTTGGAATCTGTTGAAGAAAAACTAGCAGCTTACGATTTTGGTGCAAGGTTTTATATTGAAGTTCTCGTTGACAAGTCTCTTATAACTGTTGCTGATAACGGTAACTTGGGCATGCATGATTTAGCACAACAAATGGGTAGAGAGATTGTTAGGCAAGAGGCACCGTCAAATCCTTGTAAACGCAGTAGATTATGGCATTACAAAGATGTTCTTAAAGTATTGCGTGAAAATCTAGGGAGTAGTAATATTAAAGAAATAATGCTTGATCTGCCTCAACAAGAAGTGGAGTGGAGTGGTATGGCCTTTGAGAAGATGAGTAATCTTAGGATTCTTGTGGTTCGGAATTCACAATTTTCAACCAACCCAAAGTATTTTCCGAGTAGTTTAAGATTGCTTGACTGCGCAGGATATCCTTCTACTACCCTACCACCAGACTTTTCGCCTAAGAAACTAGTTTACACCAAATTACCTGGTAGTCTTTTTAGATTGGAAGAGCCATTCAAGAGGTTTGAATGTGTGACATATATGAATTTCTCACACTGTAAATTCATAACTAAGTACCTGATATGCATGTCTCAATTTCAAAATTTAAGAAGACTGTTGTTTACAAGGTGTCGCAATCTCATCACAGTTCGCGGTTCAGTGGGATCTTTGTCTAAGCTCATTGAATTAGATCTTAGTGTGTGCAGCAGTCTTACAAGCTTTCCACGTGAAATCAAGATGGCTTCTCTTCAAAAGCTTCATGTCAGTTATTGCAGGAGTGTTGACTACTTCCCATGTATAGTGGGGAAGATGGAAGCACTGAGGACAATTTATGCAGAAGGCACTGCTATTAAAGAACTCCCACCTTCCATCGGAAATCTTCCAACACTTGAATCTTTAGCTATAAGCTCCCACAAAAGTATCAGGGAGCTTCCAAGCAGCTTATTCACACTGCAAAACCTTAGTTGGCTTAATCTATGTGGTATTCAGCCTCCAAGCAGAAAATCTTTAATGAAATTAATGCAAGAGAGCCAACCTGTTATCAGCTGTGCAAACTTGGAGACATTAAATCTCGAAAATTGTTGTCTAACTGATGAAGACCTTCACCTAGCTTTAAATTGTTTTTGGAATGTTCAAAAGTTAATTCTTTCAGGGAGCAATTTTGTTTCCCTTCCTGCGTGCATCAAAGAGTGTGCTAATCTGCAGACACTAGCGCTGAATAACTGCAAGAGGCTTAGAGACATACCAGAGTTGCCGTCAAAATTGGAAAATATAGAGGCAGAGGATTGTACTGTACGTCATTAA 1662 0.3869 MMMSLLDHSNDGICKLGIYGTGGVGKATLAKALYNSIFYQFEGACFLFDVREASKKYQGIFHLQQTLLAEILEEKKTKFGSVDEGISRIKHRISHKRVLLVLDDVDEVERLEKLADIACFFKEEDLESVEEKLAAYDFGARFYIEVLVDKSLITVADNGNLGMHDLAQQMGREIVRQEAPSNPCKRSRLWHYKDVLKVLRENLGSSNIKEIMLDLPQQEVEWSGMAFEKMSNLRILVVRNSQFSTNPKYFPSSLRLLDCAGYPSTTLPPDFSPKKLVYTKLPGSLFRLEEPFKRFECVTYMNFSHCKFITKYLICMSQFQNLRRLLFTRCRNLITVRGSVGSLSKLIELDLSVCSSLTSFPREIKMASLQKLHVSYCRSVDYFPCIVGKMEALRTIYAEGTAIKELPPSIGNLPTLESLAISSHKSIRELPSSLFTLQNLSWLNLCGIQPPSRKSLMKLMQESQPVISCANLETLNLENCCLTDEDLHLALNCFWNVQKLILSGSNFVSLPACIKECANLQTLALNNCKRLRDIPELPSKLENIEAEDCTVRH 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5039g00029 553 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 114 433 IPR044974 GO:0006952
Pral5039g00029 553 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 120 IPR027417 -
Pral5039g00029 553 SUPERFAMILY "Winged helix" DNA-binding domain 114 199 IPR036390 -
Pral5039g00029 553 Gene3D Ribonuclease Inhibitor 382 551 IPR032675 -
Pral5039g00029 553 PRINTS Disease resistance protein signature 92 106 - -
Pral5039g00029 553 PRINTS Disease resistance protein signature 341 357 - -
Pral5039g00029 553 PRINTS Disease resistance protein signature 15 30 - -
Pral5039g00029 553 SUPERFAMILY L domain-like 163 543 - -
Pral5039g00029 553 Gene3D - 1 129 IPR027417 -
Pral5039g00029 553 Gene3D Ribonuclease Inhibitor 196 381 IPR032675 -
Pral5039g00029 553 Pfam NB-ARC domain 8 114 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5039g00029 Pral-Chr5039 252334 254649 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5039g00029 116 447 WRKY Transcription Factor Family AT4G12020 34.670 1.59e-44 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5039g00029 - - pcin:129285870 518.85