Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5039g00023 ATGGTTGGACTTGAGCCTCGTTTAGAAGAAGTGATGTCACTTCTGGATGAAAGTGCTCGTAGCGTTTGTATGTTGGGGATTCATGGAACCGGTGGGATTGGCAAAACAACCCTTGCCAAAGCTTTGTATAATACAATCTTCTACCAATTTGAAGGTGCATGTTTTTTGTTTGATGTTAGAGAAGCATCAATGAAACATCATGGCAATGAGGGCATTGTTCGTCTTCAACACACGCTTTTATCAGAGATTCTTGGGGAAAAGAGGATAAAGTTTAGCAGTGTTGATGAAGGAATATCTATACTAAGACACAGACTCTCACACAAAAAAGTTTTGTTGGTTCTTGATGATGTCGATCAACCTGATCGGCTAGAGCAACTTGCAGGAGGGTGTGATTGGTTTGGTTGTGGAAGCAAGGTGATCATAACAACAAGAAATAAGCAATTGCTAATTGCACGTAATGTTGAAAAGACATATGAAATGATGGGGCTAAATGATCATGACTCGCTTGAACTCTTTTGTTGGCATGCCTTCAAGTTGAGCCAACCTCCAAAAGGATATCAAGATATGTCAAATTGTGCGAGCAGATATGCACAAGGCCTTCCTCTGGCTTTAAAATTAATAGGCTCCAATTTGGCACATAGAAACTTAGAAGAATGGAAGTCTACATTGGAACAATATGAGAAGATCCCAGAAAGGACAACTCATGAGATCCTAAAGATGAGCTATGATTGCTTACCGGATAATGCTAAGCGTATTTTCCTAGATATTGCTTGTTTCTTCAAGGCAGAGACATTTGTATACATTGAAGACATGGTAGAAGCTTGTGATTTTGGAAGGTTTTATTTTGAGGTGCTTGTTGAAAAATCTCTTATAACTATTTCTGATAATGGTAAGTTGGGCATGCATGATCTAATACAACAAATGGGTAGAGAGATTGTTAGGCAAGAGGCACCATCAAATCCTGATAAACGCAGTAGAATATGGTACTATAAAGATGTTCTTAAATTGCTTCGTGACAATTTAGGAAACAGTAATATTGAAGGAATAATGCTTGACCCCCCTCAACAAGAAGAAGTGACTTGGAGTGGTACAGCCTTCGAGAAGATGAATGATCTTAGAATTCTTGTGATTCGGAATACACAATTTTCAACAAACCCTAAATATTTACCAAATAGTTTAAGATTGCTTGATTGGGAGGGATATCCTTCTGCAAATTTACCATCAGATTTTTCTCCCAAGAAACTAACTTCCTTGAGGTTATGCAATAGCATATTCAGACTGGAAGAGCCATTCAAGAGGTTTGAATTCGTGACGCACATGAACGTTTCACATTGCGAATTCATAACTGAGGTACCTGATATGTCTCAATTCCCAAATTTAAAAAGCTTGTTGTTTAGAGAGTGTTGCAACTTGATCAAGATACACCATTCAGTGGGATCTCTCTCTAAGCTGGTCCACTTGGATGTTAGTGACTGCACCAAACTTACAAGCTTTCCACATGAAATCAACCTGCCATCTCTTGAAGATATTAATCTTAGCCGTTGTAAGAGTCTTGACTATTTCCCGCATATAGTGGGAAAGAGGGATGCCTTGACCGATATTTGGGCTGAAGACACTTCTATTAAGGAGCTCCCACATTCCATTGGAAATCTTACTGAGCTCGAATGTTTAAATTTAAGCTCTTGCAAAAGTCTCAGGGAGCTTCCAAACAGCTTATTCACATTGCAAAATCTCAAGTGGCTTGAGTTGAGAGACAGTCACACGCCTAGCAGAAAATCTTTGATGAAATTAACGCAAGAGAGCCTCCTAATTATTAGCTGTGCAAACATAAAGTTCTTGAATCTTGAAAACTGTTGTCTATTGGATGAAGATCTTACCTTAGTTCTGAATTTTTTTCGGGATTTGCGAGAGTTAACTCTATCAGGCAATGATTTTGTGTCCCTTCCTGAGTGCATCAATGAGTGTGTTGAATTATTGAAACTGGAAATGGATAACTGCAAGAAGCTAAGAGACATACCGAAGTTGCCATCAAAGCTAAGAGACATAAAGGCAGAGTTTTGCACATCATTAACTGCCAAATCAGTTGGTCATTTATGGTCTCAGGTCAAGAACGAAACCAATCTCTTCAGAATATGTATGCCAGCAACAACATTTCCTGATTGGCTTGACGATTGTTGTAAAGGAGGAGCATTGTCTTTTCGTGCTCGTGGGAATTTCCCTCGTGCAGCCCTTGCATGTGAGTTGGGGAAAGCAAACGCGAGTGGGAGACACTTCTTCCATGTTTCTGTGACCATCAATGGTCATGAAATACTAAGGAAAGAAGATGTAAACTATGGGAGTACACAAGGTCATGTGTACTTCTTTGATTTAAGATGGGCTTTTGACCTACCGGAGTGGAAGAGGCTTGATAGGTATCTGATATTGGATTGGAATGATGTGGAAATGCAAGTGAAATGTTTAACACCAAATATGCCTGTGGTTAGCTGTGGAATTTATGTGTATAAACAACACACAAACACGGACAATTTGCAGTTCAAGTCTTCTCGGCTTTCCATGAAGGCTCCAACATCTTCACTGAAACGAAGAGCGACTTCTCCCCCTCCTAATGAACCACCCAACAAAGTTCCTGAGAAAGTTCAAGGTTGCTGA 2649 0.3964 MVGLEPRLEEVMSLLDESARSVCMLGIHGTGGIGKTTLAKALYNTIFYQFEGACFLFDVREASMKHHGNEGIVRLQHTLLSEILGEKRIKFSSVDEGISILRHRLSHKKVLLVLDDVDQPDRLEQLAGGCDWFGCGSKVIITTRNKQLLIARNVEKTYEMMGLNDHDSLELFCWHAFKLSQPPKGYQDMSNCASRYAQGLPLALKLIGSNLAHRNLEEWKSTLEQYEKIPERTTHEILKMSYDCLPDNAKRIFLDIACFFKAETFVYIEDMVEACDFGRFYFEVLVEKSLITISDNGKLGMHDLIQQMGREIVRQEAPSNPDKRSRIWYYKDVLKLLRDNLGNSNIEGIMLDPPQQEEVTWSGTAFEKMNDLRILVIRNTQFSTNPKYLPNSLRLLDWEGYPSANLPSDFSPKKLTSLRLCNSIFRLEEPFKRFEFVTHMNVSHCEFITEVPDMSQFPNLKSLLFRECCNLIKIHHSVGSLSKLVHLDVSDCTKLTSFPHEINLPSLEDINLSRCKSLDYFPHIVGKRDALTDIWAEDTSIKELPHSIGNLTELECLNLSSCKSLRELPNSLFTLQNLKWLELRDSHTPSRKSLMKLTQESLLIISCANIKFLNLENCCLLDEDLTLVLNFFRDLRELTLSGNDFVSLPECINECVELLKLEMDNCKKLRDIPKLPSKLRDIKAEFCTSLTAKSVGHLWSQVKNETNLFRICMPATTFPDWLDDCCKGGALSFRARGNFPRAALACELGKANASGRHFFHVSVTINGHEILRKEDVNYGSTQGHVYFFDLRWAFDLPEWKRLDRYLILDWNDVEMQVKCLTPNMPVVSCGIYVYKQHTNTDNLQFKSSRLSMKAPTSSLKRRATSPPPNEPPNKVPEKVQGC 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5039g00023 882 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 608 IPR044974 GO:0006952
Pral5039g00023 882 Gene3D Ribonuclease Inhibitor 532 712 IPR032675 -
Pral5039g00023 882 MobiDBLite consensus disorder prediction 850 864 - -
Pral5039g00023 882 Pfam NB-ARC domain 7 230 IPR002182 GO:0043531
Pral5039g00023 882 Gene3D - 1 157 IPR027417 -
Pral5039g00023 882 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 256 IPR027417 -
Pral5039g00023 882 MobiDBLite consensus disorder prediction 850 882 - -
Pral5039g00023 882 SUPERFAMILY L domain-like 350 699 - -
Pral5039g00023 882 Gene3D - 162 246 IPR042197 -
Pral5039g00023 882 PRINTS Disease resistance protein signature 549 565 - -
Pral5039g00023 882 PRINTS Disease resistance protein signature 104 118 - -
Pral5039g00023 882 PRINTS Disease resistance protein signature 197 211 - -
Pral5039g00023 882 PRINTS Disease resistance protein signature 24 39 - -
Pral5039g00023 882 Gene3D Ribonuclease Inhibitor 340 531 IPR032675 -
Pral5039g00023 882 SUPERFAMILY "Winged helix" DNA-binding domain 235 337 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5039g00023 Pral-Chr5039 185886 190205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5039g00023 1 583 WRKY Transcription Factor Family AT4G12020 32.724 7.16e-79 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5039g00023 - - pcin:129284776 1031.55