Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5039g00022 ATGGCGATTCAAGTTTCAGCACCATCATCCCATGGCGTCGCCCGGGAACCAAAGTATAGATATGATGTTTTTCTGAGTTTTAGAGGCGAAGATACTCGCCATTCATTCACTGTCATTCTCTACAATGCTCTGCACCGTAAGGGGATCAACGCCTTCATTGATGACAAGAATCTTGGCAAAGGGGAACGGATCTCACCGACGCTTCTTAAAGCCATAGAGAAATCTAGGATTTCGATTATTGTGTTTTCTATGAACTACGCTACTTCCACATGGTGTCTGGAGGAACTTGCTCACATCGTTCGGTGTAAGAAGGAGAAGAACCAGATGGTTATGCCAATATTTTACAAGGTGGATCCGATGGATGTCCGATATCAGAGGAATAGTTTTGAGGAAGCCATGGTTGATCATGAAGATAGGTTCAGAAATGACTTGGAGAAAGTGCGAAGATGGAGGTGTGCTTTGTCTGAAGCGGCTAGTTTGTCATCGGCTTGGCTTTTCAAAGATGGATATGAATTTGGGTTTATTGAAAGGATTGTTGAAGATGCATATTCTAGGCTGCCTCCTAAACGATTCCATAACATTGATTACATGGTTGGACTTGAGCCTCGTTTAGAAGAAGTGATGTCACTTCTGGATGAAAGTGCTCGTAGCGTTTGTATGTTGGGGATTCATGGAACCGGTGGGATTGGCAAAACAACCCTTGCCAAAGCTTTGTATAATACAATCTTCTACCAATTTGAAGGTGCATGTTTTTTGTTTGATGTTAGAGAAGCATCAATGAAACATCATGGCAATGAGGGCATTGTTCGTCTTCAACACACGCTTTTATCAGAGATTCTTGGGGAAAAGAGGATAAAGTTTAGCAGTGTTGATGAAGGAATATCTATACTAAGACACAGACTCTCACACAAAAAAGTTTTGTTGGTTCTTGATGATGTCGATCAACCTGATCGGCTAGAGCAACTTGCAGGAGGGTGTGATTGGTTTGGTTGTGGAAGCAAGGTGATCATAACAACAAGAAATAAGCAATTGCTAATTGCACGTAATGTTGAAAAGACATATGAAATGATGGGGCTAAATGATCATGACTCGCTTGAACTCTTTTGTTGGCATGCCTTCAAGTTGAGCCAACCTCCAAAAGGATATCAAGATATGTCAAATTGTGCGAGCAGATATGCACAAGGCCTTCCTCTGGCTTTAAAATTAATAGGCTCCAATTTGGCACATAGAAACTTAGAAGAATGGAAGTCTACATTGGAACAATATGAGAAGATCCCAGAAAGGACAACTCATGAGATCCTAAAGATGAGCTATGATTGCTTACCGGATAATGCTAAGCGTATTTTCCTAGATATTGCTTGTTTCTTCAAGGCAGAGACATTTGTATACATTGAAGACATGGTAGAAGCTTGTGATTTTGGAAGGTTTTATTTTGAGGTGCTTGTTGAAAAATCTCTTATAACTATTTCTGATAATGGTAAGTTGGGCATGCATGATCTAATACAACAAATGGGTAGAGAGATTGTTAGGCAAGAGGCACCATCAAATCCTGATAAACGCAGTAGAATATGGTACTATAAAGATGTTCTTAAATTGCTTCGTGACAATTTAGGAAACAGTAATATTGAAGGAATAATGCTTGACCCCCCTCAACAAGAAGAAGTGACTTGGAGTGGTACAGCCTTCGAGAAGATGAATGATCTTAGAATTCTTGTGATTCGGAATACACAATTTTCAACAAACCCTAAATATTTACCAAATAGTTTAAGATTGCTTGATTGGGAGGGATATCCTTCTGCAAATTTACCATCAGATTTTTCTCCCAAGAAACTAACTTCCTTGAGGTTATGCAATAGCATATTCAGACTGGAAGAGCCATTCAAGAGGTTTGAATTCGTGACGCACATGAACGTTTCACATTGCGAATTCATAACTGAGGTACCTGATATGTCTCAATTCCCAAATTTAAAAAGCTTGTTGTTTAGAGAGTGTTGCAACTTGATCAAGATACACCATTCAGTGGGATCTCTCTCTAAGCTGGTCCACTTGGATGTTAGTGACTGCACCAAACTTACAAGCTTTCCACATGAAATCAACCTGCCATCTCTTGAAGATATTAATCTTAGCCGTTGTAAGAGTCTTGACTATTTCCCGCATATAGTGGGAAAGAGGGATGCCTTGACCGATATTTGGGCTGAAGACACTTCTATTAAGGAGCTCCCACATTCCATTGGAAATCTTACTGAGCTCGAATGTTTAAATTTAAGCTCTTGCAAAAGTCTCAGGGAGCTTCCAAACAGCTTATTCACATTGCAAAATCTCAAGTGGCTTGAGTTGAGAGACAGTCACACGCCTAGCAGAAAATCTTTGATGAAATTAACGCAAGAGAGCCTCCTAATTATTAGCTGTGCAAACATAAAGTTCTTGAATCTTGAAAACTGTTGTCTATTGGATGAAGATCTTACCTTAGTTCTGAATTTTTTTCGGGATTTGCGAGAGTTAACTCTATCAGGCAATGATTTTGTGTCCCTTCCTGAGTGCATCAATGAGTGTGTTGAATTATTGAAACTGGAAATGGATAACTGCAAGAAGCTAAGAGACATACCGAAGTTGCCATCAAAGCTAAGAGACATAAAGGCAGAGTTTTGCACATCATTAACTGCCAAATCAGTTGGTCATTTATGGTCTCAGGTCAAGAACGAAACCAATCTCTTCAGAATATGTATGCCAGCAACAACATTTCCTGATTGGCTTGACGATTGTTGTAAAGGAGGAGCATTGTCTTTTCGTGCTCGTGGGAATTTCCCTCGTGCAGCCCTTGCATGTGAGTTGGGGAAAGCAAACGCGAGTGGGAGACACTTCTTCCATGTTTCTGTGACCATCAATGGTCATGAAATACTAAGGAAAGAAGATGTAAACTATGGGAGTACACAAGGTCATGTGTACTTCTTTGATTTAAGATGGGCTTTTGACCTACCGGAGTGGAAGAGGCTTGATAGGTATCTGATATTGGATTGGAATGATGTGGAAATGCAAGTGAAATGTTTAACACCAAATATGCCTGTGGTTAGCTGTGGAATTTATGTGTATAAACAACACACAAACACGGACAATTTGCAGTTCAAGTCTTCTCGGCTTTCCATGAAGGCTCCAACATCTTCACTGAAACGAAGAGCGACTTCTCCCCCTCCTAATGAACCACCCAACAAAGTTCCTGAGAAAGTTCAAGGTTGCTGA 3237 0.4025 MAIQVSAPSSHGVAREPKYRYDVFLSFRGEDTRHSFTVILYNALHRKGINAFIDDKNLGKGERISPTLLKAIEKSRISIIVFSMNYATSTWCLEELAHIVRCKKEKNQMVMPIFYKVDPMDVRYQRNSFEEAMVDHEDRFRNDLEKVRRWRCALSEAASLSSAWLFKDGYEFGFIERIVEDAYSRLPPKRFHNIDYMVGLEPRLEEVMSLLDESARSVCMLGIHGTGGIGKTTLAKALYNTIFYQFEGACFLFDVREASMKHHGNEGIVRLQHTLLSEILGEKRIKFSSVDEGISILRHRLSHKKVLLVLDDVDQPDRLEQLAGGCDWFGCGSKVIITTRNKQLLIARNVEKTYEMMGLNDHDSLELFCWHAFKLSQPPKGYQDMSNCASRYAQGLPLALKLIGSNLAHRNLEEWKSTLEQYEKIPERTTHEILKMSYDCLPDNAKRIFLDIACFFKAETFVYIEDMVEACDFGRFYFEVLVEKSLITISDNGKLGMHDLIQQMGREIVRQEAPSNPDKRSRIWYYKDVLKLLRDNLGNSNIEGIMLDPPQQEEVTWSGTAFEKMNDLRILVIRNTQFSTNPKYLPNSLRLLDWEGYPSANLPSDFSPKKLTSLRLCNSIFRLEEPFKRFEFVTHMNVSHCEFITEVPDMSQFPNLKSLLFRECCNLIKIHHSVGSLSKLVHLDVSDCTKLTSFPHEINLPSLEDINLSRCKSLDYFPHIVGKRDALTDIWAEDTSIKELPHSIGNLTELECLNLSSCKSLRELPNSLFTLQNLKWLELRDSHTPSRKSLMKLTQESLLIISCANIKFLNLENCCLLDEDLTLVLNFFRDLRELTLSGNDFVSLPECINECVELLKLEMDNCKKLRDIPKLPSKLRDIKAEFCTSLTAKSVGHLWSQVKNETNLFRICMPATTFPDWLDDCCKGGALSFRARGNFPRAALACELGKANASGRHFFHVSVTINGHEILRKEDVNYGSTQGHVYFFDLRWAFDLPEWKRLDRYLILDWNDVEMQVKCLTPNMPVVSCGIYVYKQHTNTDNLQFKSSRLSMKAPTSSLKRRATSPPPNEPPNKVPEKVQGC 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5039g00022 1078 Pfam TIR domain 21 166 IPR000157 GO:0007165
Pral5039g00022 1078 Gene3D - 358 442 IPR042197 -
Pral5039g00022 1078 Gene3D Ribonuclease Inhibitor 536 727 IPR032675 -
Pral5039g00022 1078 Pfam NB-ARC domain 203 426 IPR002182 GO:0043531
Pral5039g00022 1078 SMART till_3 20 160 IPR000157 GO:0007165
Pral5039g00022 1078 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 452 IPR027417 -
Pral5039g00022 1078 Gene3D Ribonuclease Inhibitor 728 908 IPR032675 -
Pral5039g00022 1078 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 160 IPR035897 -
Pral5039g00022 1078 MobiDBLite consensus disorder prediction 1046 1078 - -
Pral5039g00022 1078 Gene3D - 15 187 IPR035897 -
Pral5039g00022 1078 SUPERFAMILY L domain-like 546 895 - -
Pral5039g00022 1078 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 187 - -
Pral5039g00022 1078 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 803 IPR044974 GO:0006952
Pral5039g00022 1078 PRINTS Disease resistance protein signature 220 235 - -
Pral5039g00022 1078 PRINTS Disease resistance protein signature 745 761 - -
Pral5039g00022 1078 PRINTS Disease resistance protein signature 300 314 - -
Pral5039g00022 1078 PRINTS Disease resistance protein signature 393 407 - -
Pral5039g00022 1078 Gene3D - 188 353 IPR027417 -
Pral5039g00022 1078 MobiDBLite consensus disorder prediction 1046 1060 - -
Pral5039g00022 1078 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Pral5039g00022 1078 SUPERFAMILY "Winged helix" DNA-binding domain 431 533 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5039g00022 Pral-Chr5039 184904 190205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5039g00022 21 779 WRKY Transcription Factor Family AT4G12020 30.937 2.25e-90 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5039g00022 - - pcin:129284776 1345.1