Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5039g00021 ATGGCGACTCAAGGGGCAGCATCATCATCCCTTAGCTTTACCAAGTACAGATATGATGTTTTCTTGAGTTTCAGAGGCGAAGACACTCGCAAATCCTTCACTGTCATTCTCTACGAAGCTTTGCGCAAGAAGGGAATCAACGCCTTCATTGATGACAGGAAGCTCGGTAAAGGGGAACGAATCAAACCTTCGCTTCTTAAAGCCATAGACAAATCCAGGATTTCTATTATTGTGTTCTCTGCAAACTACGCTACTTCCACATGGTGCCTTGATGAACTGGCTCACATCATTCGGTGTAACAAGAAGAAGAAGAACCAGGTGGTTATGCCAATATTTTACAAGGTGGATCCAATGGATGTCCAATATCAGAGAAATAGCTTTGAGGAAGCCATGGCTGCTCATGAAGCTGGGTTCATAAATGACCTGCAGAAAGTGCGAAAATGGAGGTCTGCGTTATTTGAAGCTGCTAGCTTGTCACCAGCATGGCTTTTCGAAGATGGATATGAATTTGGGTTTATTGAAAGGATTGTTGAAGATGCATATTCTAGGCTGCCTCCTAAACGATTCCATAACATTGATTACATGGTTGGACTTGAGCCTCGTTTAGAAGAAGTGATGTCACTTCTGGATGAAAGTGCTCGTAGCGTTTGTATGTTGGGGATTCATGGAACCGGTGGGATTGGCAAAACAACCCTTGCCAAAGCTTTGTATAATACAATCTTCTACCAATTTGAAGGTGCATGTTTTTTGTTTGATGTTAGAGAAGCATCAATGAAACATCATGGCAATGAGGGCATTGTTCGTCTTCAACACACGCTTTTATCAGAGATTCTTGGGGAAAAGAGGATAAAGTTTAGCAGTGTTGATGAAGGAATATCTATACTAAGACACAGACTCTCACACAAAAAAGTTTTGTTGGTTCTTGATGATGTCGATCAACCTGATCGGCTAGAGCAACTTGCAGGAGGGTGTGATTGGTTTGGTTGTGGAAGCAAGGTGATCATAACAACAAGAAATAAGCAATTGCTAATTGCACGTAATGTTGAAAAGACATATGAAATGATGGGGCTAAATGATCATGACTCGCTTGAACTCTTTTGTTGGCATGCCTTCAAGTTGAGCCAACCTCCAAAAGGATATCAAGATATGTCAAATTGTGCGAGCAGATATGCACAAGGCCTTCCTCTGGCTTTAAAATTAATAGGCTCCAATTTGGCACATAGAAACTTAGAAGAATGGAAGTCTACATTGGAACAATATGAGAAGATCCCAGAAAGGACAACTCATGAGATCCTAAAGATGAGCTATGATTGCTTACCGGATAATGCTAAGCGTATTTTCCTAGATATTGCTTGTTTCTTCAAGGCAGAGACATTTGTATACATTGAAGACATGGTAGAAGCTTGTGATTTTGGAAGGTTTTATTTTGAGGTGCTTGTTGAAAAATCTCTTATAACTATTTCTGATAATGGTAAGTTGGGCATGCATGATCTAATACAACAAATGGGTAGAGAGATTGTTAGGCAAGAGGCACCATCAAATCCTGATAAACGCAGTAGAATATGGTACTATAAAGATGTTCTTAAATTGCTTCGTGACAATTTAGGAAACAGTAATATTGAAGGAATAATGCTTGACCCCCCTCAACAAGAAGAAGTGACTTGGAGTGGTACAGCCTTCGAGAAGATGAATGATCTTAGAATTCTTGTGATTCGGAATACACAATTTTCAACAAACCCTAAATATTTACCAAATAGTTTAAGATTGCTTGATTGGGAGGGATATCCTTCTGCAAATTTACCATCAGATTTTTCTCCCAAGAAACTAACTTCCTTGAGGTTATGCAATAGCATATTCAGACTGGAAGAGCCATTCAAGAGGTTTGAATTCGTGACGCACATGAACGTTTCACATTGCGAATTCATAACTGAGGTACCTGATATGTCTCAATTCCCAAATTTAAAAAGCTTGTTGTTTAGAGAGTGTTGCAACTTGATCAAGATACACCATTCAGTGGGATCTCTCTCTAAGCTGGTCCACTTGGATGTTAGTGACTGCACCAAACTTACAAGCTTTCCACATGAAATCAACCTGCCATCTCTTGAAGATATTAATCTTAGCCGTTGTAAGAGTCTTGACTATTTCCCGCATATAGTGGGAAAGAGGGATGCCTTGACCGATATTTGGGCTGAAGACACTTCTATTAAGGAGCTCCCACATTCCATTGGAAATCTTACTGAGCTCGAATGTTTAAATTTAAGCTCTTGCAAAAGTCTCAGGGAGCTTCCAAACAGCTTATTCACATTGCAAAATCTCAAGTGGCTTGAGTTGAGAGACAGTCACACGCCTAGCAGAAAATCTTTGATGAAATTAACGCAAGAGAGCCTCCTAATTATTAGCTGTGCAAACATAAAGTTCTTGAATCTTGAAAACTGTTGTCTATTGGATGAAGATCTTACCTTAGTTCTGAATTTTTTTCGGGATTTGCGAGAGTTAACTCTATCAGGCAATGATTTTGTGTCCCTTCCTGAGTGCATCAATGAGTGTGTTGAATTATTGAAACTGGAAATGGATAACTGCAAGAAGCTAAGAGACATACCGAAGTTGCCATCAAAGCTAAGAGACATAAAGGCAGAGTTTTGCACATCATTAACTGCCAAATCAGTTGGTCATTTATGGTCTCAGGTCAAGAACGAAACCAATCTCTTCAGAATATGTATGCCAGCAACAACATTTCCTGATTGGCTTGACGATTGTTGTAAAGGAGGAGCATTGTCTTTTCGTGCTCGTGGGAATTTCCCTCGTGCAGCCCTTGCATGTGAGTTGGGGAAAGCAAACGCGAGTGGGAGACACTTCTTCCATGTTTCTGTGACCATCAATGGTCATGAAATACTAAGGAAAGAAGATGTAAACTATGGGAGTACACAAGGTCATGTGTACTTCTTTGATTTAAGATGGGCTTTTGACCTACCGGAGTGGAAGAGGCTTGATAGGTATCTGATATTGGATTGGAATGATGTGGAAATGCAAGTGAAATGTTTAACACCAAATATGCCTGTGGTTAGCTGTGGAATTTATGTGTATAAACAACACACAAACACGGACAATTTGCAGTTCAAGTCTTCTCGGCTTTCCATGAAGGCTCCAACATCTTCACTGAAACGAAGAGCGACTTCTCCCCCTCCTAATGAACCACCCAACAAAGTTCCTGAGAAAGTTCAAGGTTGCTGA 3231 0.4024 MATQGAASSSLSFTKYRYDVFLSFRGEDTRKSFTVILYEALRKKGINAFIDDRKLGKGERIKPSLLKAIDKSRISIIVFSANYATSTWCLDELAHIIRCNKKKKNQVVMPIFYKVDPMDVQYQRNSFEEAMAAHEAGFINDLQKVRKWRSALFEAASLSPAWLFEDGYEFGFIERIVEDAYSRLPPKRFHNIDYMVGLEPRLEEVMSLLDESARSVCMLGIHGTGGIGKTTLAKALYNTIFYQFEGACFLFDVREASMKHHGNEGIVRLQHTLLSEILGEKRIKFSSVDEGISILRHRLSHKKVLLVLDDVDQPDRLEQLAGGCDWFGCGSKVIITTRNKQLLIARNVEKTYEMMGLNDHDSLELFCWHAFKLSQPPKGYQDMSNCASRYAQGLPLALKLIGSNLAHRNLEEWKSTLEQYEKIPERTTHEILKMSYDCLPDNAKRIFLDIACFFKAETFVYIEDMVEACDFGRFYFEVLVEKSLITISDNGKLGMHDLIQQMGREIVRQEAPSNPDKRSRIWYYKDVLKLLRDNLGNSNIEGIMLDPPQQEEVTWSGTAFEKMNDLRILVIRNTQFSTNPKYLPNSLRLLDWEGYPSANLPSDFSPKKLTSLRLCNSIFRLEEPFKRFEFVTHMNVSHCEFITEVPDMSQFPNLKSLLFRECCNLIKIHHSVGSLSKLVHLDVSDCTKLTSFPHEINLPSLEDINLSRCKSLDYFPHIVGKRDALTDIWAEDTSIKELPHSIGNLTELECLNLSSCKSLRELPNSLFTLQNLKWLELRDSHTPSRKSLMKLTQESLLIISCANIKFLNLENCCLLDEDLTLVLNFFRDLRELTLSGNDFVSLPECINECVELLKLEMDNCKKLRDIPKLPSKLRDIKAEFCTSLTAKSVGHLWSQVKNETNLFRICMPATTFPDWLDDCCKGGALSFRARGNFPRAALACELGKANASGRHFFHVSVTINGHEILRKEDVNYGSTQGHVYFFDLRWAFDLPEWKRLDRYLILDWNDVEMQVKCLTPNMPVVSCGIYVYKQHTNTDNLQFKSSRLSMKAPTSSLKRRATSPPPNEPPNKVPEKVQGC 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5039g00021 1076 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 801 IPR044974 GO:0006952
Pral5039g00021 1076 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Pral5039g00021 1076 Pfam TIR domain 18 162 IPR000157 GO:0007165
Pral5039g00021 1076 MobiDBLite consensus disorder prediction 1044 1058 - -
Pral5039g00021 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 450 IPR027417 -
Pral5039g00021 1076 Pfam NB-ARC domain 201 424 IPR002182 GO:0043531
Pral5039g00021 1076 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 158 IPR035897 -
Pral5039g00021 1076 Gene3D - 12 185 IPR035897 -
Pral5039g00021 1076 PRINTS Disease resistance protein signature 218 233 - -
Pral5039g00021 1076 PRINTS Disease resistance protein signature 298 312 - -
Pral5039g00021 1076 PRINTS Disease resistance protein signature 743 759 - -
Pral5039g00021 1076 PRINTS Disease resistance protein signature 391 405 - -
Pral5039g00021 1076 Gene3D - 356 440 IPR042197 -
Pral5039g00021 1076 Gene3D - 186 351 IPR027417 -
Pral5039g00021 1076 SMART till_3 17 158 IPR000157 GO:0007165
Pral5039g00021 1076 SUPERFAMILY L domain-like 544 893 - -
Pral5039g00021 1076 Gene3D Ribonuclease Inhibitor 726 906 IPR032675 -
Pral5039g00021 1076 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 185 - -
Pral5039g00021 1076 Gene3D Ribonuclease Inhibitor 534 725 IPR032675 -
Pral5039g00021 1076 SUPERFAMILY "Winged helix" DNA-binding domain 429 531 IPR036390 -
Pral5039g00021 1076 MobiDBLite consensus disorder prediction 1044 1076 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5039g00021 Pral-Chr5039 176513 190205 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5039g00021 18 777 WRKY Transcription Factor Family AT4G12020 31.154 1.10e-90 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5039g00021 - - pcin:129284776 1338.55