Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5039g00019 ATGGATGTCCAATATCAGAGAAATAGCTTTGAGGAAGCCATGGCTGCTCATGAAGCTGGGTTCATAAATGACCTGCAGAAAGTGCGAAAATGGAGGTCTGCGTTATTTGAAGCTGCTAGCTTGTCACCAGCATGGCTTTTCGAAGATGGGTATGAATTTGGGTTTATTGAAAGGATTGTTGGAGATGTGTATGCTAGGCTTCCTCCTAAACCACACCATAATGTAGAACACATGGTTGGACTTGAGCCTCGGATAGATGAAGTGATCTCACTTTTAAATAAATCTGACAATGGTGTCTGCATGTTGGGAATTCATGGAACTGGTGGAATTGGCAAAACAACCCTTGCAAAAGCTGTCTACAATTCAATATTCTACCAATTTGAAGGTGTATGTTTCTTGTTTGATGTCAATGAGGCATCAAAAAAATTCCAGGGCATTGTTCATCTTCAACAAAAGCTTATGTCTGATATTCTTGAGGAAAAGATCCTGAGATTTTGTAGTGCTGATGAAGGAATATCTAAAATAAAACACAGACTCTCTCATAAAAGAGTTTTGTTGGTTCTTGATGATGTGGATGAGATTGAACAGTTAGAACGACTTGCAGGGGGGTGTGATTGGTTTGGTTGTGGAAGCAAGGTCATTATAACAACAAGAAATAAGCAATTGCTCATTGCTCATAATGTTAAAAGAACATATGAATTGATGCAGCTAAATGATCATGACTCTCTTGAACTCTTTTGTTGGCATGCCTTTCACATGAGCCTACCTCCAAAAGGCTACCAACAGATGTCTAGTCATGTGATAAGTTATGCAAAGGGCCTTCCTCTGGCTTTAAAATTAATTGGTGCCAATTTAGCAGATAAAAACTTAGAGGAATGGAGGTCTACATTGGAAAAATATGATCGTATCCCAGAAAGAACAATACATGAAGTACTAAAGATAAGCTATGACTGCTTACAAGATGGAGCTAAGACTGTATTCTTGGATATTGCTTGTTTCATTAGAGAGGAGATATTAGGTTCTCTTGATGAAATAGTAGACTCTTCTGATTATGGTGTAAGGTTTTATATTGAAGTGCTTATTGATAGATCTCTTATAGCTGTTACTGATACTGGTAGTTTACACATGCACGATCTGATAAAACAAATGGGTAGAGAGATTGTTAGGAAGGAGGCACCATCAAATCCAGGCAAACGTAGTCGATTATGGAATTATAAAGATGTTCTTAAAGTATTGCATGAAAATTCAGGAACTAGTAATATCGAAGGAATAATGTTTGATCGGCCTCAACAACAAGAAGTGGAGTGGAGTGGTATAGCATTTGAGAAAATGAATAATCTTAGAATCCTTATTGTCCGAAAGGCCCAATTTTCAACTGGTCCTAAATATCTTCCCAATAGTTTGAGATGGCTTGAATGGGAGGGATATCCTTCTACAAAATTGCCGCCAAAATTTTCCCCAAGCAAACTAGCTGTCTTCAAGTTATTCTGCTCTCCTTTCAAGTTGGAAGAGCCATTCATGAGATTTGAATATTTGACATGCATGAATTGCTCAAATTGTGAATTCATAACTGAAGTACCCGATATGTCTCAATGTCAAAGTTTAAGGAGATTGCTGTTTGAAGATTGTTACAATTTGATCAAAATTCATGATTCAGTGGGATCTCTCTCGAAGCTGGTTGAATTAAATGTTAGTGGATGCGTTAAACTTACAAGCTTTCCGCATGAAATCGAGATGCCATCTCTTCAAGCGATTGATTTGAGTTTTTGCGAGAGTCTTGACTACTTCCCACATATAGTTGGAAACATGGATGCATTAACGCATGTTTGGATTGAAGAAACATCTATTAAGGAGCTCCCACCTTCCATTGGAAATCTTGCCCGGCTTGAATCTTTGAACTTAAGCTCTTGCAAAAGTCTTAGGGAGCTTCCAAACAGCTTATTCACGTTTCAAAATCTTGACTGGCTTGGTTTGGAAGGCATTCATCCTGATGGCAGAAAGTCTTTAAGGAAATTATTGCAAGAGAGCCAACCAGCTAGTAGCTGCACAAACATTTAA 2058 0.381 MDVQYQRNSFEEAMAAHEAGFINDLQKVRKWRSALFEAASLSPAWLFEDGYEFGFIERIVGDVYARLPPKPHHNVEHMVGLEPRIDEVISLLNKSDNGVCMLGIHGTGGIGKTTLAKAVYNSIFYQFEGVCFLFDVNEASKKFQGIVHLQQKLMSDILEEKILRFCSADEGISKIKHRLSHKRVLLVLDDVDEIEQLERLAGGCDWFGCGSKVIITTRNKQLLIAHNVKRTYELMQLNDHDSLELFCWHAFHMSLPPKGYQQMSSHVISYAKGLPLALKLIGANLADKNLEEWRSTLEKYDRIPERTIHEVLKISYDCLQDGAKTVFLDIACFIREEILGSLDEIVDSSDYGVRFYIEVLIDRSLIAVTDTGSLHMHDLIKQMGREIVRKEAPSNPGKRSRLWNYKDVLKVLHENSGTSNIEGIMFDRPQQQEVEWSGIAFEKMNNLRILIVRKAQFSTGPKYLPNSLRWLEWEGYPSTKLPPKFSPSKLAVFKLFCSPFKLEEPFMRFEYLTCMNCSNCEFITEVPDMSQCQSLRRLLFEDCYNLIKIHDSVGSLSKLVELNVSGCVKLTSFPHEIEMPSLQAIDLSFCESLDYFPHIVGNMDALTHVWIEETSIKELPPSIGNLARLESLNLSSCKSLRELPNSLFTFQNLDWLGLEGIHPDGRKSLRKLLQESQPASSCTNI 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5039g00019 685 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 652 IPR044974 GO:0006952
Pral5039g00019 685 Pfam NB-ARC domain 84 302 IPR002182 GO:0043531
Pral5039g00019 685 Gene3D - 236 320 IPR042197 -
Pral5039g00019 685 Gene3D - 1 67 IPR035897 -
Pral5039g00019 685 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 330 IPR027417 -
Pral5039g00019 685 Gene3D Ribonuclease Inhibitor 410 681 IPR032675 -
Pral5039g00019 685 Gene3D - 68 232 IPR027417 -
Pral5039g00019 685 SUPERFAMILY L domain-like 426 660 - -
Pral5039g00019 685 PRINTS Disease resistance protein signature 624 640 - -
Pral5039g00019 685 PRINTS Disease resistance protein signature 271 285 - -
Pral5039g00019 685 PRINTS Disease resistance protein signature 101 116 - -
Pral5039g00019 685 PRINTS Disease resistance protein signature 178 192 - -
Pral5039g00019 685 SUPERFAMILY "Winged helix" DNA-binding domain 307 412 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5039g00019 Pral-Chr5039 169623 173003 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5039g00019 29 672 WRKY Transcription Factor Family AT4G12020 31.081 3.26e-86 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5039g00019 - - pcin:129286217 981.474