Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5039g00017 ATGCTTCCTCCTAAACCATACCACAACACAGAGCACATGGTTGGACTTGAATCTCGGGTAGAAGAAGTGATCTCGCTTCTTAATGAATCTGGCGTTTGCATGTTGGGAATTCATGGAACTGGTGGAATTGGCAAAACAACCCTTGCAAAAGCTGTGTATAATTCAATCTTCTACCAATTTGAAGGTGCATGTTTCTTGTTTGATGTCGGAGAAGCATCAAAGAAGTTCCGTGGTATTGTTCATCTTCAACGAAAACTTTTGTCTGATATTCTTGAGGAAAGGATCAGGGATTTTGGCAGTGCTGATGAAGGAATATCTAAAATAAAACACAGACTGTCTCATAGAAGAGTTTTGTTGGTTCTTGATGATGTTGATGGGATTGAACAGTTAGAACGACTTGCAGGAGGGTGTGATTGGTTTGGTTGTGGAAGCAAGGTCATTATAACAACAAGAGATAAGCAATTGCTAATTGCCCATAATGTTGAAAGGACATATGAATTGATGCAGCTAAATGATCATGACTCTCTTGAACTCTTTTGTTGGCATGCCTTTCATATGAGCCTACCTCCAAAAGGCTATCAACATATGTCTAGTCATGTGATAAGTTATGCAGATGGCCTTCCTCTAGCTTTAAAATTAATTGGTGCCAATTTAAAAAATAAAAATTTAAAAGAATGGAGGTCTATATTGGAACAATATGATCGTATCCCAGAAAGAACAATACATGAAGTACTGAAGATAAGCTACGACTACTTGCAAGATGGTGCGAAGATTATTTTCTTAGATATTGCTTGTTTCTTTGGAGAGGAGATGTTGGATTCTATTGATGAAATAGTAGAAGCTTGTGATTATGGTGCAAGGTTTTATATTGAAGTGCTTCTTGATAAATCTCTTTTAGCTATTACTGAAAATGGCCACTTGTACATGCATGGTCTGATAAGACAAATGGGTAGAGAGATTGTTAGGAAGGAAGCACCATCAAATCCTGGCAACCGTAGTAGATTATGGAGTTATAAAGATGTTCTTAAAGTATTATATGAAAATTCAGGAAGTAATAATATTGAAGGAATAATGTTTGATCCACCACAACCAGAAGAAGTGGAGTCCAGTGGTATAGCCTTTGAGAAGATGATTAATCTTAGAATTCTCATTATTCGAAAGGCTCAATTTTCCAGTGGCCCTAAATATCTTCCCAATAGTTTGAGATGGCTTGAATGGGATGGATATCCTTCTACAAATTTACCACCAAATTTTTCTCCAAACAAATTAGTTTTCTTCAAGTTATGTCACAGTCATTTCAGGCTGGAAGAGCCATTCAAGATGTTGGTGGATGTGTCAACCTTACAAGCTTTCCACATGAAATCAATATGCCATCTCTTGAAGAGCTTAGTCTCAATCACTGCAAGTGTCTTGACTACTTCCCACATATAG 1431 0.3718 MLPPKPYHNTEHMVGLESRVEEVISLLNESGVCMLGIHGTGGIGKTTLAKAVYNSIFYQFEGACFLFDVGEASKKFRGIVHLQRKLLSDILEERIRDFGSADEGISKIKHRLSHRRVLLVLDDVDGIEQLERLAGGCDWFGCGSKVIITTRDKQLLIAHNVERTYELMQLNDHDSLELFCWHAFHMSLPPKGYQHMSSHVISYADGLPLALKLIGANLKNKNLKEWRSILEQYDRIPERTIHEVLKISYDYLQDGAKIIFLDIACFFGEEMLDSIDEIVEACDYGARFYIEVLLDKSLLAITENGHLYMHGLIRQMGREIVRKEAPSNPGNRSRLWSYKDVLKVLYENSGSNNIEGIMFDPPQPEEVESSGIAFEKMINLRILIIRKAQFSSGPKYLPNSLRWLEWDGYPSTNLPPNFSPNKLVFFKLCHSHFRLEEPFKMLVDVSTLQAFHMKSICHLLKSLVSITASVLTTSHI 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5039g00017 476 Gene3D - 169 253 IPR042197 -
Pral5039g00017 476 SUPERFAMILY "Winged helix" DNA-binding domain 240 345 IPR036390 -
Pral5039g00017 476 PRINTS Disease resistance protein signature 204 218 - -
Pral5039g00017 476 PRINTS Disease resistance protein signature 111 125 - -
Pral5039g00017 476 PRINTS Disease resistance protein signature 34 49 - -
Pral5039g00017 476 Gene3D - 4 164 IPR027417 -
Pral5039g00017 476 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 442 IPR044974 GO:0006952
Pral5039g00017 476 Pfam NB-ARC domain 17 249 IPR002182 GO:0043531
Pral5039g00017 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 263 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5039g00017 Pral-Chr5039 161626 181969 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5039g00017 14 458 WRKY Transcription Factor Family AT5G45050 33.403 9.08e-65 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5039g00017 - - pcin:129286217 645.58