Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5039g00015 ATGCATTTGCTAATGCCTCCTAAACGCTTTCATAACACTGATCATATGGTTGGACTTGAGCCCCGCATAAAAGAGGTGATGTCAATTCTAAATAAATCTGATGATCGTGTTTGTATGGTGGGGGTCCATGGAATTGGTGGAATTGGCAAAACAACTCTTGCAAAAGCTATTTATAATTCAATCTTCTACGAATTTGAAGGTCATTGTTTTTTGTTTGATGTAAAAGAAGCATCAAAGAAATACAAGGGCATTGTCCGCCTTCAACAGACACTTCTATCAGAAATTCTTGAAGAGAAGGGGATGAAATTTGGCAGTGTTGATGAAGGAATATCAAAAATAAAACATAGACTCTCTCACAAAAAGGTTTTGTTGGTTCTTGATGATGTTGATGAGGTTGAACAGCCGGAACAACTAGCAGGGGGATGTGATTGGTTTGGTTGTGGAAGCAAGATCATTATTATTACAAGAAACAAACAATTGCTAATTGCATGTAATGTTAAAAAGGCATATGAAATGAAGAAGCTACATGAGCATTACTCTCTGGAGCTCTTTTGTTGGTACGCCTTTCATATGAGCCAACCTCCAAAAGGCTATAAAAATATGTCCATTCACGTTACAAGGTATGTACGTGGCCTTCCCTTGGCTTTGAAAGTAATAGGCTCCAATTTGGCACATAAAAGCATTGAGGAATGGAGATCTATATTGAAGCAATATGATGAGATTCCAGAAAGAACAATTCATCATGTCCTGAAGATAAGTTATGATTGTTTACAAGAGTGTGCTAAGGGTATTTTCTTAGATATTGCTTGCTTCTTCAAAGAGGAGAAATTGGAATTTGTTGAAGCAATATTAGAAGCTTGGGATCGTGGGGCAAGGTTTTATATTGAAGTTCTCGTTGATAAATCTCTGATAACTATTAATGATAAAGGTTATTTGTACATGCATGATTTAATACAACAAATGGGTAGAGAGATTGTTAGGCAAGAAGCACTATCGGATCCTGGCAAACGCAGCAGATTATGGTATTACAAAGATGTTCTCAAAGTACTACATGAAAATTTAGGAGGCAACAATATTGAAGGAATAATACTTGATCCACCTCACCAGGAAGAAGTGAAATGTAGTGATTCAGCCTTTGAGAAGATGAATAATCTTAGAATCATCATTGTTCGCAATACTCAATTTTTGACATGTCCTAAATATCTTCCGAATAGTTTAATATTACTAGATTGGCAGGGATATCCTTCTATGAATTTGCCACCAGATTTTTCGCCTCCAAAACTAGTTTGCCTCAAGATATACGGCAGTCCTTTCAGCTTGGAGGTATCGTTCGAGAGATTTGAATATTTGACGTATTTGGACTTCTCAAAGTGTGAATTCATAATTGAAGTCCCTGACATGTCTCAGTTTCAAAATTTAAAAACATTGAGCTTTCGTGAATGTCGCAGTCTGATCGAAGTTCATGATTCTGTGGGATCTCTCTCCAAGCTAGTGAAATTAGACGTTCTTGAATGCATCAAACTCACAAGCTTTCCACATGAAATCAAGATGCCATCTCTTCAAGAGTTTAATATTAGTGATTGCAAGAGTCTTAAGTACTTCCCAGAAATCGTGGGAAACATGGATCCACTGATGTATATTAATGCAGAAGGCAGTGCTATTAATGAGCTCCCATCATCTATTGGAAATCTTCCAAGGCTTCGTTCTTTAAATTTAAGATCTTGCAGAAATCTTAGAGGGCTTCCAAACAGCTTATTGACATTGCATAATCTTGGAGTGCTTCTATTAGGAGACATAAAACCTCATGGAAGAAAATCTTTGAAGAAATTAATGCAAGAGAGCCAACCACCAACTATTAGCTGCACGAATTTAGATCGCTTGGAACTCCAAAATTGTGGTCTATTGGATGATCTTCACCTAATTCTGAAATGTTTTCGAAATGTGAGATACTTAAATCTATCAGGGAATGATTTTGTATACCTTCCCGAGTGCATTAAGGAGTGTGCTTATTTGGAGAGACTAGATCTGAGTGCCTGCAAGAGGCTAAGAGACATACCAGAGTTACCATTAACTCTGCAGAGCATAGCTGCAGATAAGTGCATGTCATTAACTTTGGAGTCGATACGTCATTTATGGTCTCAGGCAAAAGAGGGCTTTCGCGTGGAAATCGTTATGCCAGCAATATCATTTCCTGATTGGTTACACTTTTGTTGTAAAGGTGGCAAATTGTCTTTTCGTGTCCGTGGAAATTTCCCACATGTCCTCATCGCATACGAGACAGGGAAGGCAAACACAAGTGGGATATACACATTAGAAGTTTTTATGAGGATCAATGGCAGTAAAAAAATGCCATGGGTACAAAGTGATCGTGATGCAAGAGAAAAGGGTCGTTTTGTGCTTTCTGTAGGATATCAAGCTCATGTATTCTTCTATGATCTACTAAGTGATTTTAGTGAAGAAGAGTTGGAGGAGCTTAATAAGTTTTTGGGATTGGAATGGAATGATGCGGACATACAAGTTACGTCTGACTCACCAGCTGATATGTCCATAATTAACTGTGGTATTTATGTCAATAAGCAACAGACAAGTATGGAAAATGTTCAATTCAAGTCTCCTTTGCGTTCCATGAATGCTTCAAGAGCTTCGCTGAAACGAAGAGCAGTAGCTTCTCATCCCAACGAACCACCCAAGAAGCACTTGAGAAGGTTCAAAGAGAAGATCAATTGCACAAGAAGGACAAGGCAAGCTAAGCCACACCGAATTTTCCATTCGCAGTGCAAGAGAAGGATGTGTTTTCCTATGTCTAAGCATCTTTTGAGAGCTTTGTTTTTTTTTTGA 2838 0.3802 MHLLMPPKRFHNTDHMVGLEPRIKEVMSILNKSDDRVCMVGVHGIGGIGKTTLAKAIYNSIFYEFEGHCFLFDVKEASKKYKGIVRLQQTLLSEILEEKGMKFGSVDEGISKIKHRLSHKKVLLVLDDVDEVEQPEQLAGGCDWFGCGSKIIIITRNKQLLIACNVKKAYEMKKLHEHYSLELFCWYAFHMSQPPKGYKNMSIHVTRYVRGLPLALKVIGSNLAHKSIEEWRSILKQYDEIPERTIHHVLKISYDCLQECAKGIFLDIACFFKEEKLEFVEAILEAWDRGARFYIEVLVDKSLITINDKGYLYMHDLIQQMGREIVRQEALSDPGKRSRLWYYKDVLKVLHENLGGNNIEGIILDPPHQEEVKCSDSAFEKMNNLRIIIVRNTQFLTCPKYLPNSLILLDWQGYPSMNLPPDFSPPKLVCLKIYGSPFSLEVSFERFEYLTYLDFSKCEFIIEVPDMSQFQNLKTLSFRECRSLIEVHDSVGSLSKLVKLDVLECIKLTSFPHEIKMPSLQEFNISDCKSLKYFPEIVGNMDPLMYINAEGSAINELPSSIGNLPRLRSLNLRSCRNLRGLPNSLLTLHNLGVLLLGDIKPHGRKSLKKLMQESQPPTISCTNLDRLELQNCGLLDDLHLILKCFRNVRYLNLSGNDFVYLPECIKECAYLERLDLSACKRLRDIPELPLTLQSIAADKCMSLTLESIRHLWSQAKEGFRVEIVMPAISFPDWLHFCCKGGKLSFRVRGNFPHVLIAYETGKANTSGIYTLEVFMRINGSKKMPWVQSDRDAREKGRFVLSVGYQAHVFFYDLLSDFSEEELEELNKFLGLEWNDADIQVTSDSPADMSIINCGIYVNKQQTSMENVQFKSPLRSMNASRASLKRRAVASHPNEPPKKHLRRFKEKINCTRRTRQAKPHRIFHSQCKRRMCFPMSKHLLRALFFF 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5039g00015 945 Gene3D Ribonuclease Inhibitor 545 716 IPR032675 -
Pral5039g00015 945 Gene3D Ribonuclease Inhibitor 346 544 IPR032675 -
Pral5039g00015 945 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 585 IPR044974 GO:0006952
Pral5039g00015 945 SUPERFAMILY L domain-like 329 704 - -
Pral5039g00015 945 Pfam NB-ARC domain 22 252 IPR002182 GO:0043531
Pral5039g00015 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 268 IPR027417 -
Pral5039g00015 945 Gene3D - 174 258 IPR042197 -
Pral5039g00015 945 PRINTS Disease resistance protein signature 562 578 - -
Pral5039g00015 945 PRINTS Disease resistance protein signature 116 130 - -
Pral5039g00015 945 PRINTS Disease resistance protein signature 209 223 - -
Pral5039g00015 945 PRINTS Disease resistance protein signature 39 54 - -
Pral5039g00015 945 SUPERFAMILY "Winged helix" DNA-binding domain 245 350 IPR036390 -
Pral5039g00015 945 Gene3D - 6 172 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5039g00015 Pral-Chr5039 152828 156605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5039g00015 15 675 WRKY Transcription Factor Family AT4G12020 31.517 3.03e-76 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5039g00015 - - pcin:129284776 1107.82