Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5039g00004 ATGGCTGCTCTTGAAGACAGGTTCAGAGATGACTTAGAGAAAGTAAGAAAATGGAGGTCTGCTTTGTTTGAAGCTGCTAGCTTATCATCAGCATGGCTTTTTGAAAATGTTACGCATGTTAGCTATGCATTTGTTATGCTGCCTCCCAAACGCTTCCATAGCACTGATTACACGGTTGGACTTGAGCCTCACATAGAAAAAGTGATGTCCCTTGTAAATAAATATGATGATAGTGTTTGTATGTTGGGGATTTATGGAACTGGAGGGAAAGGCAAAAAAACTCTTGCAAAGGCTGTTTACAATTCAATCTTCTACCAATTTGAAGGTTCATGCTTTTTGTTTGATATTAGAGAAGAATCAAACAAATACAAGGGCATTGTTCTTCTTCAACAGTCACTTCTATCGGAAATTCTTGAGGAAAAGAAGATGACTTTTAGTAGTATTGATGACGGAATATCTAGAATAAAACACAGACTCTCTCACAAAAAAGTTCTGTTAGTTCTTGATGATGATGACATTGAACAATTAGAACAACTTGCAGGCAGAATATTAGAAGCTTGTGATTATGGAGCAAGATTTTATATTGAAGTTCTTGCGGAAAAGTCTCTAATAACTATTAGTGATAATGGTCGCCTGGACATGCATGATTTAATACAACAAATGGGAAAGCAAATTGTTAGAAAGGAGACAAAGTCAGATCTTGGTAAACGAAGTAGATTATGGTATTACAAAGATGTGCTCAAAGTATTGCCAGAAAATTTGAAGTTTGAACATGTGACACATATGGATTTCTCACATTGTGAATTTATAACTGAAGTACCTGATATGTCTCAGTTCCAAAGCCTAAGAAGATTTTTGTTTCAAGGGTGTCGCAATCTGCTCAAAGTTCATGATTCAGCGGGCCGGGATCTCTCTCCAGGTTGGTTCGATTAG 933 0.3687 MAALEDRFRDDLEKVRKWRSALFEAASLSSAWLFENVTHVSYAFVMLPPKRFHSTDYTVGLEPHIEKVMSLVNKYDDSVCMLGIYGTGGKGKKTLAKAVYNSIFYQFEGSCFLFDIREESNKYKGIVLLQQSLLSEILEEKKMTFSSIDDGISRIKHRLSHKKVLLVLDDDDIEQLEQLAGRILEACDYGARFYIEVLAEKSLITISDNGRLDMHDLIQQMGKQIVRKETKSDLGKRSRLWYYKDVLKVLPENLKFEHVTHMDFSHCEFITEVPDMSQFQSLRRFLFQGCRNLLKVHDSAGRDLSPGWFD 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5039g00004 310 SUPERFAMILY "Winged helix" DNA-binding domain 174 250 IPR036390 -
Pral5039g00004 310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 179 IPR027417 -
Pral5039g00004 310 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 194 250 IPR044974 GO:0006952
Pral5039g00004 310 Pfam NB-ARC domain 63 170 IPR002182 GO:0043531
Pral5039g00004 310 PRINTS Disease resistance protein signature 158 172 - -
Pral5039g00004 310 PRINTS Disease resistance protein signature 81 96 - -
Pral5039g00004 310 Gene3D - 48 205 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5039g00004 Pral-Chr5039 50545 53341 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5039g00004 182 241 WRKY Transcription Factor Family AT5G45050 50.000 6.69e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5039g00004 - - pcin:129296950 231.876