Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5039g00003 ATGGCTCTTCAGTATCAGAGAGACAGCTTTGCAACAGCCATGGCTGCTCATGAAGACATATTCAGAGGTGATCCAGAGAAAGTGCAGAAATGGAAATCTGCTTTGTCTGAAGCAGCTTCTCTGTCGACGGCCTGGATTTTTGAAGACAGGAACGAATTTGAGTTTATGGAAAGGATTGTTAAAGATGCATATGCTATGTTGCCACCTAAACAATTACATCACATCGGGTACATGGTTGGACTTGAGCCTCGTGTGGAAGAAGTGATTTCACTTTTAAATCAATCCAATGATAGAGTGCATGTTTTTTGTTTGATGTCAAAGAAAGCACCAAAGAAATACCAGGGCATCGTTCGCCTCCAACAGAAACTTCTATCAGAGATTCTTGGGGAGAAAATTATGGTGATTGGGAGTGTTGATAAAGGAATGTCAAGAATAAAACATCGGTTTTGTCATAAAAAGGTTCTTTTGGTTCTTGATGATGTTGACGAGGCTGAACAGTTAGAACAACTTGCGGGAGGGTGTGACTGGTTTGGTTTTGGAAGCAAAGTTATTATAACAAGAAATAAGCAAATGCTAGTTGCACACAATGTTGAAAAAACATATGAAATGATGAAGCTGAATCAGTATGACTCTTGTGAGCTCTTTTGTTGGCATGCCTTCCATGAGAACCAACCTCCAATAGCCTATCAAGATATGTCTAGTCGTGCAATAAGTTATGCACAAGGCCTTCCTCTGGCATTAAAAGTAATAGGCTCCAAGTTGGCAAATGAAAATTTAGAGGAATGGAAGTCTATATTGGAACAATATGAAAGAATCCCTGAAAGAACAATTCATGAGATTCTAAAGATGAGCTATGATTGCTTACAAGCGGGTGCTAAGCGTATTTTCCTAGATATTGCTTGTTTTATTAACAAGGAGATGATGAGATCTATTAATGAAATAGTAGAAGCTTGTGATTTTGGCGCTAGGTTTTATTTTGAACTTCTTGTCGATAAATCTCTGATAACTTCAGTTGCTGGTGAAGATTATTTTTTCATGCATGAGCTAATACGACAAATGGGAAGAGAAATCGTGAGACAAGAGGCACATTTAATCCTGAAAAACGCAGCAGACTATGGTATTATGAAGACGTTCTTAAAGTATTGCGGATGCAATAATATTGAAGGAATAAGGCTTGATCCTCCTCAGCAAGAAAAAGTAAAGTGGAGTGGTATGGCTTTTGAGAAGATGAATAATCTTAGAATTCTTGTCGTTCGAAATATCCAATTTTCAACTGGCCCTACCTATCTTCCCAATAATTTAAGGTGGCTTGAATGGAAGGGATATCCTTTTGCAGCTTTGCCAAAAGATTTTTCTCCTTCAGAACTAATTTTCTTGAAGTTACCTGAAAGTTCTTTTAGACTAAAAGAAGCACTGAATATTTTGACTAGCTATGTGACATATTTGGATTTTTCATTTTGTCAATTCATAACTGAAGTACCTGATATGGCTCAATATCAATGTTTACGAATATTGGATTTGCAACGCTGTCACAATCTGATAAAAATCCATGATTCATTGGGATCCCTCTCTAAGCTGATCGAATTAAATGTTAGTGAATGCACCAAACTTTCCATTTTTCCACGTGAAATCAAGATGGCATCACTTGAATGGCTTAGTTTTAGCGGATGCAGGAGTCTTGAGTACTTCCCACATGTGGCGGGAAAGATGGATGCACTAGACTACATTTCAATAGATGGCACTGCTATTAAGGAGCTCCCACCTTCAATTGAAAATCTTTCGGGGCTTCGATGGTTATACGCGCGCTCCTGCAGTAGTCTTAGAGAACTTCCAACCAGCTTATTCATGTTGCCAAATCTTGAGGAGCTTGATTACGGAGAGGTTCATCCGCGTAACAGAAAATCTTGGATGAAGTTAAAGCAAGATAGCCAACCAATTACCAGCAACTGTTCTATGAAGAGTTTGTCTCTCAAGAATTGTGGTCTATTGGATGAAGAACTTCACCTAATTCTGAATTGTTTTCGAAATTTACGAGAGATATATGTATCATTGAATGACTTTGTGTCTCTCCCTAAGTGCATTAAAGATTGTGCCGAACTGCGGCTAGCTGTGAGTGAATGCAGGAGGCTAAGAGACATGCCAGAGTTGCCATCAAAGCTGCATGAGATAGATGCAACGAATTGCACATCATTAACCGCAGAATCATTGGACAACTTATATTCTCAGGCAAAAAAGGAGTTGCTTGACCTGCGAATCCATGTGCCAGTAACAACATTTCCTGATTGGTTCAACTATTGCGGTGAAGGAGGCACGTTGTCTTTTCGCGTTCGTGGGAATTTACCTCGTGGTATTCTTGCATTTGAGGTCGCAGGGAAAGCAAGCATGAGTAAGGACCAGATCTTCCCATTTGTTATGGGTATTAATGGTCTCCAAGCAAAAAAGGAGTTGCTTGACTTGAAAATCAATGTGCCAGTAACAAAATTTCCTGATTGGTTCAACTGTTGCTGTGAAGGAGACACGTCTTTTCGCGTTCGTGGGAATTTACCTCGTGGTATTGTTGCATTTGAGGTCGCAGGGAAACCGAACATGGGGAGGGAATAG 2601 0.396 MALQYQRDSFATAMAAHEDIFRGDPEKVQKWKSALSEAASLSTAWIFEDRNEFEFMERIVKDAYAMLPPKQLHHIGYMVGLEPRVEEVISLLNQSNDRVHVFCLMSKKAPKKYQGIVRLQQKLLSEILGEKIMVIGSVDKGMSRIKHRFCHKKVLLVLDDVDEAEQLEQLAGGCDWFGFGSKVIITRNKQMLVAHNVEKTYEMMKLNQYDSCELFCWHAFHENQPPIAYQDMSSRAISYAQGLPLALKVIGSKLANENLEEWKSILEQYERIPERTIHEILKMSYDCLQAGAKRIFLDIACFINKEMMRSINEIVEACDFGARFYFELLVDKSLITSVAGEDYFFMHELIRQMGREIVRQEAHLILKNAADYGIMKTFLKYCGCNNIEGIRLDPPQQEKVKWSGMAFEKMNNLRILVVRNIQFSTGPTYLPNNLRWLEWKGYPFAALPKDFSPSELIFLKLPESSFRLKEALNILTSYVTYLDFSFCQFITEVPDMAQYQCLRILDLQRCHNLIKIHDSLGSLSKLIELNVSECTKLSIFPREIKMASLEWLSFSGCRSLEYFPHVAGKMDALDYISIDGTAIKELPPSIENLSGLRWLYARSCSSLRELPTSLFMLPNLEELDYGEVHPRNRKSWMKLKQDSQPITSNCSMKSLSLKNCGLLDEELHLILNCFRNLREIYVSLNDFVSLPKCIKDCAELRLAVSECRRLRDMPELPSKLHEIDATNCTSLTAESLDNLYSQAKKELLDLRIHVPVTTFPDWFNYCGEGGTLSFRVRGNLPRGILAFEVAGKASMSKDQIFPFVMGINGLQAKKELLDLKINVPVTKFPDWFNCCCEGDTSFRVRGNLPRGIVAFEVAGKPNMGRE 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5039g00003 866 Coils Coil 252 272 - -
Pral5039g00003 866 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 299 IPR027417 -
Pral5039g00003 866 Pfam NB-ARC domain 141 288 IPR002182 GO:0043531
Pral5039g00003 866 Gene3D - 206 289 IPR042197 -
Pral5039g00003 866 SUPERFAMILY L domain-like 393 740 - -
Pral5039g00003 866 Gene3D - 2 74 IPR035897 -
Pral5039g00003 866 SUPERFAMILY "Winged helix" DNA-binding domain 276 365 IPR036390 -
Pral5039g00003 866 Gene3D - 77 205 IPR027417 -
Pral5039g00003 866 PRINTS Disease resistance protein signature 148 162 - -
Pral5039g00003 866 PRINTS Disease resistance protein signature 240 254 - -
Pral5039g00003 866 PRINTS Disease resistance protein signature 497 513 - -
Pral5039g00003 866 Gene3D Ribonuclease Inhibitor 381 571 IPR032675 -
Pral5039g00003 866 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 612 IPR044974 GO:0006952
Pral5039g00003 866 Gene3D Ribonuclease Inhibitor 572 765 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5039g00003 Pral-Chr5039 24731 32183 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5039g00003 29 624 WRKY Transcription Factor Family AT4G12020 29.830 1.83e-65 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5039g00003 - - pcin:129285870 866.3