Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5039g00002 ATGAAATTTTGGTCTGGTAACGCCTTTACCAATGTTGCGCTCAGAACTCAGGGGCAGCGAAGGTCATATGTGCTAGATGTTTTGAGCGGATCACATTCCTCCAAATCCAATACCTCTATCTCTTTAGTTATGATCACTCCAAATCAAGAGCCATCATCATCTACTGGATCGTCCTCCAGCGAATCAACTTCCAATCATTACGATGTTTTCCTGAATTCCACAAGCGAATCAACATTCACTACCACTCTCTGCGATGCTTTGCGAAAGAAGGGAATCGAGAAAATCTTCGTCGGTCCCAATAAACTGAGGGAAAAGAAAAGAAAGAGGGAAAGCAAACAAGTTTTTGCATCACCTGATCCTCTTAGCGCGATTGAAAAATCAAAGGTTTCTATTCTTGTGTTCTCTGGGGATTATGCTTCTTCTGCTGAGTGCCTTGATGAGCTCGTCAAGATTATGAAGTGCAGGAGGAAAAAGAAGCTAGTGGTTTTTCCGATCTTCTACCAAATAGAACCGACGATTGTTCGGCATCAGAAAGGTAAGTATGAAGAAGCCATGGTTGCTCATCAACAGAGCTTCGGAGACGAACAGGTTCAGCAATGGAAGTCGGCGTTGAACGAAGCCGCCGGTTTGTCCGGATGGCATTTTGTTGAAGGATCTGAACATGATTTTGCTAAGATTGTTGAAGAGGCATTTTCCAAGTTGCCGCCTAAACGATTACATATTGGGGAGCACATAGTTGGACTCGACGCTTGCATAAAAGATGTCACTTCACTTCTTGATGCCGTGTCTATTTTAGGAATTCATGGAACTGAAGGAGTTGGCAAAACTACACTTGCTAAAGCTGCATATAATTTAGTTGTCCACCAATTTGAAGAGGCTTGTTTTCTTACTGACATAAGAACAGCTCCTAAAGGAAGCAAAGGCGTGGTACGTCTTCAAAAGACGCTTCTATCAGAGATTCTTGATGAGAAGAAAAAGATCAAGTTAAGAAGTGTTGAAGAAGGGATCTCTAAGATAAAGCAGAGGCTATGCCATAGAAGGGTTCTTCTTGTTCTTGATGACATAGATGAGATGGAACAATTAGAACAACTTGCGGGAGGTCGTGATTGGTGTGGAAATGGCAGTAAAGTGATCGTGACAACAAGAAATAAGCAATTACTGATTGATGGTCATATTGATGAATATGGAATGAAGGAGCTAAATAACAATGACTCCCTTGAGCTTTTCTCTCGATATGCCTTCCACTTGGACAAACCCCCAGCGGATTATGAAGAAATCTCCAACCATCTGGTGAGTTATGCACAAGGCCTTCCTTTGGCTTTGAAAGCTATGGGCTCTAAATTGAAAAATAAAAGCATGGAGGCATGGAAATGTGCATTGGATCAATTGGAGAAACTTCCAGAAAGGAAGGTTGAAGATGTTCTCAAAATAATGGGAAAGTAG 1443 0.4179 MKFWSGNAFTNVALRTQGQRRSYVLDVLSGSHSSKSNTSISLVMITPNQEPSSSTGSSSSESTSNHYDVFLNSTSESTFTTTLCDALRKKGIEKIFVGPNKLREKKRKRESKQVFASPDPLSAIEKSKVSILVFSGDYASSAECLDELVKIMKCRRKKKLVVFPIFYQIEPTIVRHQKGKYEEAMVAHQQSFGDEQVQQWKSALNEAAGLSGWHFVEGSEHDFAKIVEEAFSKLPPKRLHIGEHIVGLDACIKDVTSLLDAVSILGIHGTEGVGKTTLAKAAYNLVVHQFEEACFLTDIRTAPKGSKGVVRLQKTLLSEILDEKKKIKLRSVEEGISKIKQRLCHRRVLLVLDDIDEMEQLEQLAGGRDWCGNGSKVIVTTRNKQLLIDGHIDEYGMKELNNNDSLELFSRYAFHLDKPPADYEEISNHLVSYAQGLPLALKAMGSKLKNKSMEAWKCALDQLEKLPERKVEDVLKIMGK 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5039g00002 480 Gene3D - 399 478 IPR042197 -
Pral5039g00002 480 SUPERFAMILY Toll/Interleukin receptor TIR domain 57 213 IPR035897 -
Pral5039g00002 480 PRINTS Disease resistance protein signature 264 279 - -
Pral5039g00002 480 PRINTS Disease resistance protein signature 434 448 - -
Pral5039g00002 480 PRINTS Disease resistance protein signature 342 356 - -
Pral5039g00002 480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 238 477 IPR027417 -
Pral5039g00002 480 SMART AAA_5 261 406 IPR003593 GO:0016887
Pral5039g00002 480 Pfam TIR domain 67 214 IPR000157 GO:0007165
Pral5039g00002 480 Gene3D - 236 392 IPR027417 -
Pral5039g00002 480 Gene3D - 63 235 IPR035897 -
Pral5039g00002 480 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 67 466 IPR044974 GO:0006952
Pral5039g00002 480 SMART till_3 66 210 IPR000157 GO:0007165
Pral5039g00002 480 ProSiteProfiles TIR domain profile. 65 234 IPR000157 GO:0007165
Pral5039g00002 480 Pfam NB-ARC domain 263 466 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5039g00002 Pral-Chr5039 20995 23555 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5039g00002 109 446 WRKY Transcription Factor Family AT4G12020 26.957 4.12e-31 125