Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5039g00001 ATGGGGGTTGGATGGAACCAGTTTGGATTATGGTTCAAAATATATATTGCCTTGATTTCTTTGTGGGAAATTCGAGTGTGTTGGTCGCTGAACAGCGAAGGGTTAGCCTTGTTGGATTTTCGAGATAGAATAACATGTGATCCTTATGGAGCTTTGGTGAATTGGAATCCAAATGACGGTGACCCTTGCAAATGGTTGGGTGTTCATTGCATTGACAGTAAAGTTCAAATTCTAGACTTAAACTCCTTATCTTTGGAAGGGACATTGGCCCCAGAGCTTGGGAAGCTTAGTCACTTAAAATCTCTTGTGTTGTGTAAGAACAATTTCTCTGGAACCGTTCCCAAGGGACTTGGAGCTTTAGCCAAACTGGAGTTATTGGATTTGAGGAGCAATAACTTTACTGGAACTATTCCAGTGGAAGTTAGCAGCTTATCAGAACTGAAACACTTGTTGCTTTGCGGCAATAAAATTGAAGTCAATGTTTGTCAGGATGTTGAAAAGTCCAATTTACCCTCTAAATGGTTATTTGTCGACAAGTGTGGCTTGCATAGAAAATTTGGAAATGGTGTATGGCAGAGAAATTTTATACTGTTAAACAAGGCTGTTTCTAGAGTTATTCAAATTAAAGGAGAACTTGTGAAATACTTCAATGCTTTGGTGCTGCCACTGTTGAAGCTGGATAAAGCTCTTGATCTTTGTCAAGTGAATTTCTATCACAATCAACATGATTTTCATGAGCCTGTGGTTGCCCAAACTATAACAACCCTCATCAATTCCGTACGTCGCAGGTTACTTGATCAATCTAGTAACCTCGCAGCTGCAGCTGCACCTGTCAGTGTTGGTCCTACCAAACCAATTGTTTCTCTTCCAGCAACCTTGAGTAGTGGAGCTTTCCCGGCTGTGCCACATGCCAAGCAACAAAATCTATCTCCTGCACCGCCTCCAACTGCTAATTCCCCACCTAATACACCAAATCAAGACCAAACTTCTACTTGGAAACAAGAGCATTCAACTAAAGGCACTTCTGGAAATTTGTGGCTTTATATAATTATTATCATTTCATTTGTGGTTGTGTTGGTCATTATTGCTGTGACTATATTCTGTTTGTGGCGAGCGCGAGCAGCCAAAACAATAAGCCCTTGGAAAACAGGGATAAGTGGACAATTACAAAAGGCGTTTGTAACAGGGGTTCCCAAACTGAATCGACCAGAGCTGGAGACAGCCTGTGAGGATTTCAGCAATATTATTGATAATTTTGATTATTACGCCATATACAAAGGAACACTGTCGAGTGGAGTTGAGATTGCTGTTGTTTCTACTAATGTCACTTCTTCTAAAGAATGGTCAAAGAATGCAGAGATGTTCTACAGGAAAACGATTAGTACATTGTCTCGTGTGAATCATAAGAACTTCATAAATCTTATTGGTTTCTGTGAGGAAGAAGAACCATTCACAAGGATGATGATTTTTGAGTATGCTCCTAATGGTTCCTTGTTTGAGCATCTCCATGTTAAGGAAGATGAATATCTTGATTGGAGTGCAAGGACGAGGATTGTTATGGGAATTGCTTATTGTTTGCAGTACATGCACCATGATCTAAATCCACCAGTATCTCATTCCGATCTTAGTTCATCTTCCATTTATTTAACAGATGACTTTGCTGCCAAGATAGCATATATGAGTTTTGACAACCCATCCATACTAGAAGAAAAAGGATCTAGCCATTCTCAGTTGCCACCCAAAGCAAATCCTGAAACAAATGTTTATAATTTTGGAATGGTGTTGCTTGAAATAATTTCTGGAAAGCTCCCTTACTCTGAAGAACATGGTCATCTCACCGAATTGGCCGCCGATCACATCAAAAACAACAGAAGCATCAATTATATGATCGATCCTATTCTCCAATCATACGAAAAGGATCAACTTGATGTGATCTGTGAAGTAATACAAGATTGCATCCAAACAGATGCAAGGTTCAGACCTCCAATGAAGGATGTAGTTTCCAAATTGAGAGCAGTCATTAATATATCACCTGAACAAGCGGTTCCGAGACTTTCTCCTCTTTGGTGGGCTGAACTGGAAATATTGTCTCTTGAGGCCAATTAA 2106 0.3984 MGVGWNQFGLWFKIYIALISLWEIRVCWSLNSEGLALLDFRDRITCDPYGALVNWNPNDGDPCKWLGVHCIDSKVQILDLNSLSLEGTLAPELGKLSHLKSLVLCKNNFSGTVPKGLGALAKLELLDLRSNNFTGTIPVEVSSLSELKHLLLCGNKIEVNVCQDVEKSNLPSKWLFVDKCGLHRKFGNGVWQRNFILLNKAVSRVIQIKGELVKYFNALVLPLLKLDKALDLCQVNFYHNQHDFHEPVVAQTITTLINSVRRRLLDQSSNLAAAAAPVSVGPTKPIVSLPATLSSGAFPAVPHAKQQNLSPAPPPTANSPPNTPNQDQTSTWKQEHSTKGTSGNLWLYIIIIISFVVVLVIIAVTIFCLWRARAAKTISPWKTGISGQLQKAFVTGVPKLNRPELETACEDFSNIIDNFDYYAIYKGTLSSGVEIAVVSTNVTSSKEWSKNAEMFYRKTISTLSRVNHKNFINLIGFCEEEEPFTRMMIFEYAPNGSLFEHLHVKEDEYLDWSARTRIVMGIAYCLQYMHHDLNPPVSHSDLSSSSIYLTDDFAAKIAYMSFDNPSILEEKGSSHSQLPPKANPETNVYNFGMVLLEIISGKLPYSEEHGHLTELAADHIKNNRSINYMIDPILQSYEKDQLDVICEVIQDCIQTDARFRPPMKDVVSKLRAVINISPEQAVPRLSPLWWAELEILSLEAN 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5039g00001 701 ProSiteProfiles Protein kinase domain profile. 410 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5039g00001 701 PANTHER PROTEIN MALE DISCOVERER 2 24 698 - -
Pral5039g00001 701 Gene3D Transferase(Phosphotransferase) domain 1 493 682 - -
Pral5039g00001 701 Pfam Protein tyrosine and serine/threonine kinase 424 670 IPR001245 GO:0004672|GO:0006468
Pral5039g00001 701 MobiDBLite consensus disorder prediction 322 339 - -
Pral5039g00001 701 Pfam Leucine rich repeat 97 157 IPR001611 GO:0005515
Pral5039g00001 701 MobiDBLite consensus disorder prediction 304 339 - -
Pral5039g00001 701 FunFam Leucine-rich repeat receptor-like kinase 34 144 - -
Pral5039g00001 701 SUPERFAMILY Protein kinase-like (PK-like) 397 670 IPR011009 -
Pral5039g00001 701 FunFam Inactive receptor-like serine/threonine-protein kinase 384 492 - -
Pral5039g00001 701 Gene3D Ribonuclease Inhibitor 29 194 IPR032675 -
Pral5039g00001 701 Gene3D Phosphorylase Kinase; domain 1 387 492 - -
Pral5039g00001 701 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Pral5039g00001 701 SUPERFAMILY L domain-like 28 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5039g00001 Pral-Chr5039 7384 11769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5039g00001 75 683 Receptor kinase-like Gene Family AT5G65700 25.253 2.32e-42 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pral5039g00001 PK_Tyr_Ser-Thr 2.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5039g00001 - - qsa:O6P43_012777 830.861