Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5038g00001 ATGAAATCTCAAGTCCAAGACAGGTTCCATGACTTCTATCACACCTGGTTCTGCAAGCTCGAAGAAATCCTCCACCACCTTCTTCAACTTTCCACTCTCAGAACCCAAATGCTGCCTCTCAAAGAACACGACGTTAACGTTCAGCATTTGGTGAACACAGCCACCACTCATATCAAGCAATATTATACCGTGAAATGGGCTGAAGCTCGTGAAGATGTTCTTCCCTTCTTCGCTCCCACTTGGCTCACTCCTCTCGAGAATGCCTCCTCTTGGATCACCGGATGGAAGCCTTCCATGGTTTTCCGGCTGGTTCGGAGTCTCGCGACGGCGTCGTTTGGTATGAGCGAGGAGCAGGCCAGGAAGATAGAGGAGCTTAGGATGAGGATGAGGATGGAGGAGGAGAAGGTGGAGAGGGAGATGGAGAGGTTGCAGGTGGCTATGGCAGACCATAAGATGGTCGAGCTGGCGAAGCTCTCGAGCAGGGCGGAGGGCAGCGGCCCCGGGGTGGCAGCTGGCCGGGAGGGGGAAGTGGCGGTGAAGGGAGTGTTGGATGGGTTGGAAAGGACAATGAAGGGGGCGGATTGCGTGAGGCTGAAGACACTGAAAGGAGTGCTGGATTTGCTGACGCCATTGCAGTGTGTGGAGTTCTTGGCTGCGGTTCTTGCCCTGCAACTTCGTCTAAGACAATGGGGGAAGAAGGAGACAGGCATGCCTCATGTCCCCAGGTTGAATGAGCGACGGCCAGTTACAAATTGA 756 0.5423 MKSQVQDRFHDFYHTWFCKLEEILHHLLQLSTLRTQMLPLKEHDVNVQHLVNTATTHIKQYYTVKWAEAREDVLPFFAPTWLTPLENASSWITGWKPSMVFRLVRSLATASFGMSEEQARKIEELRMRMRMEEEKVEREMERLQVAMADHKMVELAKLSSRAEGSGPGVAAGREGEVAVKGVLDGLERTMKGADCVRLKTLKGVLDLLTPLQCVEFLAAVLALQLRLRQWGKKETGMPHVPRLNERRPVTN 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5038g00001 251 Pfam Seed dormancy control 30 106 IPR025422 GO:0006351|GO:0043565
Pral5038g00001 251 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 235 - -
Pral5038g00001 251 Coils Coil 115 153 - -
Pral5038g00001 251 ProSiteProfiles DOG1 domain profile. 6 237 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5038g00001 Pral-Chr5038 15797 16552 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5038g00001 44 228 bZIP Transcription Factor Family AT5G06960 27.957 2.19e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5038g00001 - - gmx:100788540 268.855