Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5037g00020 ATGGATACTATTACTTGCGGTTTGGTTGAGAAGTTCCGAGACGTAGTGCTCGACCTAACTTGGGAGCAGCTTCTTTATCTCATTCACTATCGCAGAAACATTGAGCACTTCAATGAACAACTTGAGAACCTCACCCTTAGAAGATGCTCCATACAACATGAAATAGATGAGGCTATAAACAATGGAGAACAAATTAAAGAGGAAGTTAGTCATTGGTTGGTCAAAGTAGATAAGATATCAGAGAAAGTACGAAAGCTCCAAGAAAAGAATCAGGCAAAAACAGAGCGTAGCATAACTTCATGTCCCAATCCTTGGCTACGCTATAAACTAAGCAAAAAAGCAGAGGTGACTCGGCAAGAAGTTGTTAACATTTATGGGGAGGGAAATTTTGGTAGAGTTTCATATCGTGTTCCTCCCAAGTCAATGCCAGAATTACCCAACACAGGCAGCAATGAAGGGATTGATTCAAGAGTACCGATTATGAATCAAATTATGGAGGCATTACGGAGTCCAAGTGTTAATACGATCGGATTGTGTGGGCTTCCTGGTGTTGGCAAGACCACCATAGCTAGAGAGGTTGAAAAGAAGGTGAAGAATCAAAAGATGTTTGAAAATGTGATCATGGCAATTGTTTCCAAAGAATTGAACGTTGAGAAGATTCAAGGCCAGATTGCTGATAAGCTGGGTATGCAACTCAGTGAAAGAGCTGAAGATGTCAGAGCTTCTCGTTTGTGGAAGAGGTTGGCGAAAGAGAAGAATATGCTCCTAATATTGGATGACCTTTGGGAGGAACTTGATTTGCGCAAAGTTGGAATTCCCTTAGTTGATGTTGAAAATTATAGCAGAGAGAATGAAGGTTGCAAAATTTTACTAACTTCAAGGAATAAAAGGCTGCTGTCAGATGTCATGAAATGTCAAGAAATTATCGAAGTGGGTGTTTTGTCAGAGGATGAAGCAATGGAGTTGTTCAAGAGGATTGCTCCACATCCTACTGACTTGAGCAATCCTGACTCGATATCTATAACCTCTCAAATAGTTCAAAAGTGCGGTGGCTTGCCACTAGCGCTTGCTACAGCTGCCAAGGCATTGAGCAATAAAGAGCTAAATGTGTGGAAGGATTACCTTGCACGATGGACAAATCACTTAAGAAGAAACATCTCAGGAATTGAAAAGGTGGATGGCTCCTTGAAATTGAACTATGATCTTCTAAGCCAAGAGAACAAAACTATTTTCTTGCTTGCTGCCATGTTAACCCATGATTCCTCAATTGAAGACCTGCTCATGTGCTCTGTGGGGTTAGATATTTTGAAAGGCGTAGAGAACATGGAAGAAGCCTATGTAGGAATCTCTAATAATGTTAGAAAGCTAAAATCATTAAACTTATTTCTGGATAGCATTTCTAGTCATCATGTTACAATCCATGACGTCTTTCGAGATATTGCATTATCGATTGCAGACGGTGAATTACATGCATTCATTTTGAGGCATAAAAGCTTGACAAAATGGCCAGATGAAGATAAGCTAGAAGACCGCAAGGGAATTTGCTTGCAAGAAATTGACATCAGTGTTAACCTTCCAGAAGAGTTGCATGCTCCAACATTAGAATTCTTTCTACTGCACAGCACAAAACAACATGACTTGATTATACCCAGCATGTTTTTCAAATCTTCAAAGAAGCTAAAACTGTTGGCATTTACTGATGTGCGTTTTGAATCACTACCATCACTCAGTTTCCTACTAAAACTAAAAACATTGTGTCTGCACTCTTGTTGGCTACGAGATATAACTGAAGTCACAACGTTGAAGAATTTAGAAGTGTTAAGTCTTGCTTACTCTGAAATTCAACAGTTGCCAATTCAATTAAAAGAGTTGACTTCTTTACAAATGTTGAATTTGTCCCACTGCTTTGAACTCAAAGTGATTCCACCAAATGTCCTATCTAGCTTGACAAAATTGGAGGTTTTGTTAATGGAAAGCAGCTTTGACAAGTGGAAAGTTGAAGGATCTAGTGAAGCTGATGAAAATGCAAGTCTTGACGAATTGAAGGACTTGCCAATCTCTTCTCTTGATATTCGTATTCCTAATGTCTCTATGTGTCCGGAGAACTTGTTCTTAGCTATGAATATGCAGAGATACAGAATACTTATTGGAAACAAATGGAACTGGTGGGAATGCAATCATAACAGTTCAAAGATATTGAAACTTGAGCTTGAGAGGTTATGA 2223 0.3905 MDTITCGLVEKFRDVVLDLTWEQLLYLIHYRRNIEHFNEQLENLTLRRCSIQHEIDEAINNGEQIKEEVSHWLVKVDKISEKVRKLQEKNQAKTERSITSCPNPWLRYKLSKKAEVTRQEVVNIYGEGNFGRVSYRVPPKSMPELPNTGSNEGIDSRVPIMNQIMEALRSPSVNTIGLCGLPGVGKTTIAREVEKKVKNQKMFENVIMAIVSKELNVEKIQGQIADKLGMQLSERAEDVRASRLWKRLAKEKNMLLILDDLWEELDLRKVGIPLVDVENYSRENEGCKILLTSRNKRLLSDVMKCQEIIEVGVLSEDEAMELFKRIAPHPTDLSNPDSISITSQIVQKCGGLPLALATAAKALSNKELNVWKDYLARWTNHLRRNISGIEKVDGSLKLNYDLLSQENKTIFLLAAMLTHDSSIEDLLMCSVGLDILKGVENMEEAYVGISNNVRKLKSLNLFLDSISSHHVTIHDVFRDIALSIADGELHAFILRHKSLTKWPDEDKLEDRKGICLQEIDISVNLPEELHAPTLEFFLLHSTKQHDLIIPSMFFKSSKKLKLLAFTDVRFESLPSLSFLLKLKTLCLHSCWLRDITEVTTLKNLEVLSLAYSEIQQLPIQLKELTSLQMLNLSHCFELKVIPPNVLSSLTKLEVLLMESSFDKWKVEGSSEADENASLDELKDLPISSLDIRIPNVSMCPENLFLAMNMQRYRILIGNKWNWWECNHNSSKILKLELERL 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5037g00020 740 Gene3D Ribonuclease Inhibitor 523 740 IPR032675 -
Pral5037g00020 740 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 412 IPR027417 -
Pral5037g00020 740 Coils Coil 27 47 - -
Pral5037g00020 740 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 726 - -
Pral5037g00020 740 Coils Coil 76 96 - -
Pral5037g00020 740 SMART AAA_5 172 314 IPR003593 GO:0016887
Pral5037g00020 740 Gene3D - 313 404 IPR042197 -
Pral5037g00020 740 SUPERFAMILY L domain-like 508 658 - -
Pral5037g00020 740 PRINTS Disease resistance protein signature 248 262 - -
Pral5037g00020 740 PRINTS Disease resistance protein signature 622 638 - -
Pral5037g00020 740 PRINTS Disease resistance protein signature 175 190 - -
Pral5037g00020 740 PRINTS Disease resistance protein signature 349 363 - -
Pral5037g00020 740 Gene3D - 139 311 IPR027417 -
Pral5037g00020 740 Pfam NB-ARC domain 161 401 IPR002182 GO:0043531
Pral5037g00020 740 FunFam Probable disease resistance protein At1g61300 141 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5037g00020 Pral-Chr5037 544113 546430 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5037g00020 173 488 WRKY Transcription Factor Family AT5G45050 23.620 7.71e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5037g00020 - - pcin:129285257 750.355