Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5037g00012 ATGGAGGAATTACGGAATCCAAGTGTTAATATGATCGGATTGTGTGGGCCTGGTGGTGTTGGCAAGACCACTATAGCTAAAGAGGTAGCAAAGAGCCAAAAGATGTTTTCAAAGGTGATCATGGCGACTATTTCTGATGAGTTGAATGTTGAGAAGATTCAAGGCCAGATTGCTGAGAAGCTGGGTATGCAACTCAATGAAAAAACTGAAGAAGTAAGAGCTTGTCGTCTCTGTGAGAGGTTAAAGCTAGAGAAGAATATGCTCCTCATATTGGACGATCTTTGGGAGGAACTTGATTTGGGAAGCGTTGGAATTCCCTTTGTTGATGTTGAAAATTATAGCAAAAAGGACGGAGGTTGCAAAATTTTACTAACTTCAAGGAATGAAACGCTACTGTCACACCGCATGAAATGTCAAAAACTTATCAAAATAGGTGTTTTGTTACAGAATGAAGCATTGGAGTTGTTCAAGAGGATTGCTGAACTTTCTGCTGATTCAAGCAATCTTGAGCTGATATCTATAGCCTCTGAGATTGTTCAAAAGTGTGGACGCTTGCCGCTAGCGATTGCTACAGCCGCTAAGGCATTGAGGGGAAAAAATTTGGATGAGTGGAAAGATTACCTTGCACGATGGAAAAATTATTTAAGGAGAAACAACACAGGAATTAAAGAGGTGGATTCTTCTTTGAAGTTGAGCTACGATCCTCTAAGCTTGGAGAATAAAACTATTTTCTTGCTCTCTGCCATGTTGTCCCATGATCCCTCAATTGATGACCTGCTCATGTACTCTCTGGGATTAGATATTCTTGAAGGCATAGAAAATATAGAAGAAGCCCACGTTGGAATATGTGCTATTGTAAGTAAGCTAAAATCATTAAACTTATTTCTTGATAGCTTTTCTGGTCGTCGTGTTACGATACATGACGTCTTTCGAGATGTTGCATTATCAATTGCTTCCAATGAATTAAATGTTTTCATTGTGAGGCATAGAAGCTTGAAAGAATGGCCAGACAAAAATAAGCTAGAAGGCTACAAGGGAATTTGCTTACAAGATAGTGACATCAGTGAGCTTCCAGAAGAGCTGCATGGTCCAAGATTAGAATTTTTTCTACTAGACAGCACAAAGCGTGATTTGATCATATCCAACATGTTGTTCAAATCTTCAAGGGAGATGAAAGTGTTGGCTTTTACCAATGTGCATTTTTCATCACTACCATCACTTAGTTTCTTACAAAAACTAAAAACATTGTGTCTACACTCTTGCTTACTGGAAGATATAGCTGAGGTTAGAAGCTTGAAGAATTTAAAAGTCCTGAGTCTTGCCTACTCTGAGATTCAACGACTACCAGCTGAATTGGCACAACTGACTTCTTTACAGATGCTGAATTTGGCCCACTGCTCTGAACTCAAAGTGATTCCCCCAAAGCTCCTATCTAGCTTGAAAAAATTGGAAGTTTTGTACATGGGAAATAGCTTTAATCGATGGAAAGTTGAAGGATCTAGTGAAGCTATTGAAAATGCAAGTCTTGAAGAGTTAAAGGATTTGCCGATCTCTTCACTAGATGTTCATATTCCTAACGTCTCTATGTTGCCGGAGAACTTGTTCTTAGATATGCATTTGAAGAGATACAGAATACTCATTGGACAGCATTGGGAATGGCAAGGCAATTATGAAAGTTCAAAGATATTGAAAATTGAGCTTGAGAGTAGCATCCATTTGAACACTGGGGTTCGAAAGTTAATGAGGGGAGCTGAAGATTTGTATTTATATGGATCTAATGGGCTTGAAAATGTTCTTCGTGGTCATGATGGAAGAGCATTTCCACATTTAAGGCATCTTCAGATTGAAAGTAATGATACTATTAGATACATTGTTTTGAACTCGGCACATCATGAAGCTGCAAAAAATAACGTATCTAATAAAATGTCGAAGTTACTTCTCAACCAGGTGTTATTCCCAAAATTAGAGGGGTTGGAATTGTCCAATTCAATCAGTTTGATTCCATTGATATGGGATGACCAACTTTCACACACCTCATTTAGCAATTTGAAAACATTGATTGTGGAAAATTGTGGCTTTGTGAAATTGGTGCCTCTTCATGTGCTAAAGTCTTTAAACAATTTGGAAGCATTAGAAGTCAGGGATTGTCACGTGTTGGAGATGGTGTTTGATTTTGAAGATTCGAATGAATATAAAGAGAAGACGTCATCATCACTTAAGGTTGTGCCGTTGAAGAAGTTAACGCTAGATGGATTGCCAAAATTGAAGAATGTGTGGAGCAATCACTACCAGGGAAATGTCTCCTTCCCAAGTCTAACGAATGTATCTGCTTACGATTGTGAAAGCCTCACAAGTATGTTTCCTGCATCTATAGTCAAAGGCATGCTTCGTAATCTTGAACGGCTTCATATATCCGATTGTGGTATAGATGTAATTGTTGCAACAGATCAAGTTTCAGAATCTGTTGCTTCTACACTTGAGTTTCCCACGCTGACTTCCCTTGACCTTTCTTTCCTTCAAAATTTGAAGAACTTCTATCCACAGAAACACACATTAGAATGGCCACAACTTCGGCGATTATCTATTAGATATTGTGATGAAATAGAGATATTTGAAAAGGAAGTCTCAAGTTCACTAGAAATTCATGAGGAAAAGCGCACATTAGACTCAAAATATCCTCTACTGTCCCATGACAAGGATATTCGTAATTTGGAGGAGTTGAGATTGGAGGGTAAAGGGGCTGAGATGATAGGGAGTGGCCAGTTTCCAGCGTACCCCTTCCCCAAAGTAAAACTGCTTCATCTCTCTGTAAAGAAAGCCACAACTATATCGTACAAATCATTGTTGAAGAGCTTTCCAAAATTAGAGGAGTTAGAGTTGGATGGTGACATTAAGGAGGCAGTTGGAGGGGACGAAGTTCCCTTTCCAATAAAATTGACTCTCCAGAATCTTAACAAGATGATAAGCTTGTCACCATCCTTGCCAAATCTCACGCATCTTACAGTGAGATATTCTTATGGGCTGACCACTTTGATGACGTCATCAACTGCTCGAAGCTTGGTCCATCTCACACATCTCTCAATTGGTCGCTGCCGTCAAATAGAGGAAATCATCTCGAAGCATGAAGGAGAGGATGATGAGGATAAGGAAATCTTTTTCAACAAATTGCAGTACTTGCAATTTGACAGATGTCCAAGATTGAAGAGATTTTGTGGCCACGATTATACTTTCAGGTTTCCATTATTGGATACTCTAATCATAAGAGGATGTCCAAAATTGGAAATATTCTCTCCAGGACTCATTGATACACCATCTCTTCAAAGCATTCAGTTGTCAGACGATGAGGGAAAACGTCATGAAATTTGGGACACCACCGACCTTAACAAAACAATCCACCAACAGCGATTTGTCTGTACAAGAGAGCTGGTGTTAGATGAGGATGATGTCAGCATGATAAGGAATGACCAATTTCCAGCGGACTGTTTTTCTCACCTGGAAATTCTTCGCATAGAAGGATTTGTTGGTGAAGGGGTAACATTTCCGTACACATTGCTTGGAAGATTTCCGAAACTGAGTGAACTTCGTGTGAAGAATAGTTTTTTTGAGGAGGTATTCCCATCACATAATGCACGCATTAGTGTTGATCAAATTCCACCGTTCAGGGAACTCTACCTTGCCAATTTGACGGTGCTCAAGGTGTACGAGTGTAATCGGCTCGTCTATTTAATAACAAATTCAACTTCCAAAAGCTTGGTGAATCTTGAAACATTGGAGATACGTTACTGCCATAAGATGGAAGAAATTAATGTGTAA 3813 0.3921 MEELRNPSVNMIGLCGPGGVGKTTIAKEVAKSQKMFSKVIMATISDELNVEKIQGQIAEKLGMQLNEKTEEVRACRLCERLKLEKNMLLILDDLWEELDLGSVGIPFVDVENYSKKDGGCKILLTSRNETLLSHRMKCQKLIKIGVLLQNEALELFKRIAELSADSSNLELISIASEIVQKCGRLPLAIATAAKALRGKNLDEWKDYLARWKNYLRRNNTGIKEVDSSLKLSYDPLSLENKTIFLLSAMLSHDPSIDDLLMYSLGLDILEGIENIEEAHVGICAIVSKLKSLNLFLDSFSGRRVTIHDVFRDVALSIASNELNVFIVRHRSLKEWPDKNKLEGYKGICLQDSDISELPEELHGPRLEFFLLDSTKRDLIISNMLFKSSREMKVLAFTNVHFSSLPSLSFLQKLKTLCLHSCLLEDIAEVRSLKNLKVLSLAYSEIQRLPAELAQLTSLQMLNLAHCSELKVIPPKLLSSLKKLEVLYMGNSFNRWKVEGSSEAIENASLEELKDLPISSLDVHIPNVSMLPENLFLDMHLKRYRILIGQHWEWQGNYESSKILKIELESSIHLNTGVRKLMRGAEDLYLYGSNGLENVLRGHDGRAFPHLRHLQIESNDTIRYIVLNSAHHEAAKNNVSNKMSKLLLNQVLFPKLEGLELSNSISLIPLIWDDQLSHTSFSNLKTLIVENCGFVKLVPLHVLKSLNNLEALEVRDCHVLEMVFDFEDSNEYKEKTSSSLKVVPLKKLTLDGLPKLKNVWSNHYQGNVSFPSLTNVSAYDCESLTSMFPASIVKGMLRNLERLHISDCGIDVIVATDQVSESVASTLEFPTLTSLDLSFLQNLKNFYPQKHTLEWPQLRRLSIRYCDEIEIFEKEVSSSLEIHEEKRTLDSKYPLLSHDKDIRNLEELRLEGKGAEMIGSGQFPAYPFPKVKLLHLSVKKATTISYKSLLKSFPKLEELELDGDIKEAVGGDEVPFPIKLTLQNLNKMISLSPSLPNLTHLTVRYSYGLTTLMTSSTARSLVHLTHLSIGRCRQIEEIISKHEGEDDEDKEIFFNKLQYLQFDRCPRLKRFCGHDYTFRFPLLDTLIIRGCPKLEIFSPGLIDTPSLQSIQLSDDEGKRHEIWDTTDLNKTIHQQRFVCTRELVLDEDDVSMIRNDQFPADCFSHLEILRIEGFVGEGVTFPYTLLGRFPKLSELRVKNSFFEEVFPSHNARISVDQIPPFRELYLANLTVLKVYECNRLVYLITNSTSKSLVNLETLEIRYCHKMEEINV 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5037g00012 1270 SUPERFAMILY L domain-like 901 1113 - -
Pral5037g00012 1270 Gene3D - 147 237 IPR042197 -
Pral5037g00012 1270 SMART AAA_5 8 146 IPR003593 GO:0016887
Pral5037g00012 1270 Gene3D - 1 144 IPR027417 -
Pral5037g00012 1270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 245 IPR027417 -
Pral5037g00012 1270 SUPERFAMILY L domain-like 306 877 - -
Pral5037g00012 1270 Pfam Leucine rich repeat 412 466 IPR001611 GO:0005515
Pral5037g00012 1270 Pfam NB-ARC domain 6 234 IPR002182 GO:0043531
Pral5037g00012 1270 SUPERFAMILY RNI-like 1159 1264 - -
Pral5037g00012 1270 PRINTS Disease resistance protein signature 81 95 - -
Pral5037g00012 1270 PRINTS Disease resistance protein signature 182 196 - -
Pral5037g00012 1270 PRINTS Disease resistance protein signature 453 469 - -
Pral5037g00012 1270 PRINTS Disease resistance protein signature 11 26 - -
Pral5037g00012 1270 Gene3D Ribonuclease Inhibitor 342 883 IPR032675 -
Pral5037g00012 1270 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 900 1107 - -
Pral5037g00012 1270 Gene3D Ribonuclease Inhibitor 887 1270 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5037g00012 Pral-Chr5037 385224 391456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5037g00012 9 473 WRKY Transcription Factor Family AT5G45050 24.436 4.04e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5037g00012 - - pcin:129285257 857.055