Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5037g00009 ATGGTCTCTGACAAGAAACTTGTTATGAATGGAAGTATTCTTGCATTTGTAGCTACACCCATCATGCTCCTCAAAGCTGCTGATTACTATTGGGAGATTGAGGTTTACATACGCCTTGAAAGTGCAAAGTTTGACATTGGCCACTACTCATATTCTTGTGTTTCTGAATATAGACAGCAACCAACCAGAAGAAGAAGAAACCTGTTGAAGAAGAAACCTGTTCCAACTTCCAGCCATATATTGAAGGGCGAAAAAGGAAAGACGGGAAAAAGTGGAAATCAAGTTTTCATCGTCATTAATTCGGAAAAAAAAAAGAGTGCAAATTCAATGGATATCACTTGCGGAACATTGAGTAGTTTGGTTGACAAGTTCCGGGATCTAGTGATCGATCTAACCTGGGAGCAGCTTCGTTATCTGTTTCAGTATCACAGAAACATTGAGGAGCTCAATGAACGACTTGAGGAACTCACCCTTGAAAGAAGCTCCAAACAACAGCAAATAGATAATGCTAAAAAAAATTTAGAACAAATTGAAGAGAAAGTTGAGCATTGGTTGGGCAAAGTAGATGAGATTTTAGAGCAAACACAAATGTTTCATGAAGAAGAGAGTCAAGCAAAAACAGAGTGTAGCGTAACTTCCTGTCCCAACCTGTGGCTACGTTATAAACTAAGCAAAAGAGCAAAGGCAATGGCACAACAAGTTGTTGAAATCTATGGAAAGGGAAACTTTGATAGATTTTCATATCCTATTCCTCCCGCATCGATGCCAGAGGTACTCATCAGAGAAAGCAATGAAGGGATTGGTTCAAGAACGCAAATTTTGAATCAAATTATGGAGCACTTACATTATCCTAGTGTTAGTATTGTTGGATTGTCTGGGCTTGGTGGTGTTGGCAAGACCACTATAGCTAAAGAGGTAGCAAAGAAGGCGAAGAATCAAACCATGTTTGAAAAGGTGATCATGGCAACTGTTTCTGAAGAATTGAACATTGAGAAGATTCAAGGCGAGATTGCAGAGAACCTGGCTTTCCAACTCAATGAAAAATCTGAAGGAGTAAGAGCTCGTCGTCTGTGTGAGAGGTTGAAGCTAGAGAAGAATATGCTCCTAATATTGGATGATCTTTGGGAGGAACTTGATTTGGGCAAAGTTGGAATTCCCTTTGTTGATGTTGGAAGTTATAGCAAAAAGAATGAAGGCTGCAAAATTTTACTAACTTCAAGGAATAAGATGCTGTTGTTAAACCGCATGAAATGTCAAGAAATTATCGAAGTGGATGTTTTGTCAGAGGATGAAGCATTAGAGTTGTTCAAGAGGACTTCTGAACTTCCTATTGACTCAAGCACTCCTGACAACTTGATATCTATAGCCTCTCAGATTGTTCGAAAGTGTCATGGCTTGACATTAGCGATTGCAACAGCTGCCAAGGCATTAAGGGGAAAAAATCTAGGTGAGTGGCAAGAATTCTACAAACGATTGAATCATCCTTTAAGGAGAAACATCACAGGAATTAAAGAGGTGGATGCGATATTGAAGTCGAGTTATGATTGTCTAAGCTCAGAGAAAAAACGTATGTTCTTGCTCTCCGCCATGCTGTCCCATGATCCCTCAATTGAGGACCTGCTCATGTACTCTATGGGGTTAGATATTCTTGACGGCATAGAAAAGATAGAAGATGCCCACAGTGGAGTCTCTACTACCGTAGGTGATCTAAAATCATTAAACTTATTTCTTGATAGCTTTTCTAGTCACCGCTTTACAATACATGACGTCTTTCGAGATGTTGTATTATCGATCACACCCAACGAATTAAATGCATTCATTGTGAGGCATAGAAGCTTGACAGAATGGCCAGACCCAAAAAAGCTCGAAGACTACAAGGGAATTTGCTTACAGAAGAGTGACATCAGTGACCTTCCAGAAGAGCTGCACGGTTCAAGATTAGAATTCTTTCTGCTAGACAGCACCGAACGTGATTTGGCCATACCTAAGATGTTTTTCAAATCATCAAAGGAGCTGAAAGTGTTGGCATTTACCAATGTAAATTTTTCATCACTACCATCGCTCATGTTCCTGCAAAAACTAAAAACATTGTGTCTCCACTCTTGTTTGCTAGAAGACATAATTGAGGTTAGAAGCTTGAAGAAGTTAAAAGTCCTAAGTCTTGCTTACTCTGAAATTCAACAACTACCTATTGAATTGGCAGAGTTAACTTCTTTAGAAATGTTGAATTTAGCCCACTGCTCCAAGCTCAAAGTGATTCCACCAAAACTGCTATCTAGCTTCAAAAAATTGGGGGTTTTGCTTATGGCAAATAGCTTTCACCAGTGGAAAGTTGAAGGATCTACCGAAGCTAATGAAAACGCGAGTCTTGACGAGTTGAAGGGCTTGCCAATCTGTTCTCTAGATATTCATATTCCTAATGTCTCGATGTTGCCGGAGAATTTGTTCTTAGATATGAATTTGATGAGATACAAAATACTCATTGGGAAGCACTGGAAATGGTGGACGGTCAGCTATAAAACTTCAAAGGTGTTGAAACTTGAGCTTGAGAGTGATATCTATTTGAAGCCTGGGGTTCGAAAGTTGATGAAAGGAGCTGAAGATTTGTGTTTATATGGATCTAATGGGCTTGAAAATGTTCTACATGGTCATGATGGAAGATCATTTCTGCATTTAAGGCATCTTCAGATTGAAAGTAACGATGCTATTGAGTCCATTGTTTGGAACTCAGCACATCATGAAGCAGCAACAAATAACATATCCAATAAAATGTCTGAGTCGCTTTTGAACAAGGTGTTGCTTCCTAAATTAGAGATATTGCGATTATTTAATTCAATCAGTTTGATTCCATTGATATGGGAGGACCAACTTTCACACAACTCATTTAGGAACTTGAAAACATTGTTTGTGAAAAATTGTCGCTTTGTGAAATTGGTGCCCCTTCGTGTGCTGAGATCTTTCAACAACTTGGAAGAACTAAAAGTTAACGACTGTGACACGTTGGAGTTGGTGTTTGATTTTGAAGACTTGAATGATTATAAAGAGGCGGAGTCATCATCAGTGATTGTGCCATTGAAAAAGTTAACGCTTTATAAATTGCGAAAATTGAAAAATGTGTGGAGCAATCACTATAAAGGAGACGTCTCCTTCCCAAGTCTAAGGAGCGTGCATGTTTCCTCTTGTGAAAGCCTCGCTAGTCTGTTTCCTGCATCTATAGCCAAAGGCATGCTTCGTGATCTTGAAGAGCTTCGAATAAGCGATTGTGGTATAGAGGTGATTGTTGCAAAAGATCAAGTTTCAGAATCTGTTGCTCCTTTGTTAGAGTTTCCCAGGTTGACTCTCCTTGAGCTTTCTTCGCTTAAAAATTTGAGGAATTTCTATCCACAGAGACACACATTAGAATGGCCACATCTTTATCAATTATCTATTAGAAGTTGTGATGAATTGGAGATATTTGAAAAGGAAGTCTCAAGTTCATTAGAAATACACAAGGAAGGGAGCTCATTAGACTCAAAATATCCTGTACTGTCCCAATGCAAGGTGTTGCTTCCAAAAATAGAGATATTGCGATTATCTAATTCAATCGGTTTGATTCCATTGATATGGGAGGACCAACTTTCACACAACTCATTTAGGAACTTGAAAACATTGTTTGTGAAAAATTGTCGCTTTGTGAAATTGGTGCCCCTTCGTGTGCTGAGATCTTTAAACAACTTGGAAGAACTAGAAGTTAGGGACTGTGACACGTTAGAGTTGGTGTTTGATTTTGAAGACTTGAATGATTATAAAGAGGCGGAGTCATCATCAGTGATTGTGCCACTGAAAAAGTTAACGCTTTATGCATTGCGAAAATTGAAGAATGTGTGGAGCAATCACTATAAAGGAGACGTCTCCTTCCCAAGTCTAAGGAGCGTGCATGTTTCCTTTTGTGATAGCCTCACTAGTCTGTTTCCTGCATCCATAGCCAAAGGCATGCTTCGTGATCTTGAAGAGCTTCGAATAGAATATTGTGGTATAGACGTGATTGTTGCAAAAGATCAAGTTTCAGAATCCATTGCTTCTACGTTTGAGTTTCCCAGGTTGACTCTCCTTGAGCTTTTTTGGCTACAAAATTTGAGGAATTTCTATCCACAGAGACACACATTAGAATGGCCACATCTTTATCGATTATCTATTGAATTTTGTGATGAATTGGAGATATTTGAAAAGGAAGTCTCAAGTTCATTAGAAATACACGAGGAATGGAGCTCATTAGACTCAAAATATCCTCTACTGTCTCAATGCAAGGTCACTCATAATTTGGAGGAGTTGACATTAGAGAGTAAAGGAGCTGAGATGATAGGGAGTGGCCAGCTTTCCATGTACCACTTCCCCAAAGTAAAACTGCTTCATCTACGTGCTGATAAAACAACGACTATTTCATACAAATTGTTGTTGAAGAGCTTTCCAAATTTAGAGGAGATGACACTGGCGGGTCACATTAAGAAGGCTTCTGGAGGGGATGATGTTCCTCTTCCAATAAAATTGACTCTCAAATCTATTTCCAAAATCACAAGCTTGGTACCACTCTTAGTTTCTTCACCAAATCTCACACATCTCAAAGTGACATATTGTGATGAGTTGACCACTCTGATGACGTCATCAGTTGCTCGAAGCTTGGTCCATCTCACAAGTCTCTCAATTAGTGGGTGCGATGACATAAAGGAAATTATATGGAAGCAAGAAGGAGAGGATGATGACGATGAGGAAGTCGTTTTCAGCAAGTTGCAGCATTTGAAAGTTGAACGGTTACCAGAATTGAAGAGATTTTGCCGCTACAATTATACTTTCAGGTTTCCATTATTGGAACAGGTGATCATAACAGGATGTCCGAAATTCAAAGTATTCTCTCCAGGACTCATTGATACACCATCTCTTAAAAGCGTTCTACTGTCACAAGATATGTATGGAAAACCTCATGAAATTTGGGACACCAATCTTAAAAATACATTCTACCAACAGAGATTTGTGGCATCAAGAGAGATGGTGTTAGATGAGTATGATGTTACCATGATAAGGAATGACCAATTTCCAGTGGATTGTCTTGCTCAAGTGGAAACTCTGGGCATAGACGGATTTGATGATGAAGGGGCAACATTTCCGCATACATTGCTTGAAAGATTTCCGCGGCTGACTGAGCTTCGTGTGGAGGATAGTTCTTTCGAGGAGATATTCCCATCACCCATTGTTCATCAAAATCAACTTCTTCATAATTTGACAGTGCTGAAGGTGTCCCAATGTCATCAGCTCATCCATTTAATGACAAATTCAGCTGCCAAAACTTTGGTGAGTCTTGAAACATTGGACATATATTATTGCGAAAAGATGGAGAAAATTGTAAAGAATGAGAATAATGACGATGTGGAAGGTGGAATCACGTTCAGTGCGTTGAGAAGATTAAAACTCATGCATCTACCAAGATTGAAAGTGGAAGGGCATAAAATGGATTTCAGCATTGAAGACCCAGCAACAAATAATCATAAGGTTTATGTTTTCAAAATAGAAGGAAAATTTGTAATTAGGGCAAAATACAAGGAAGGGTAG 5583 0.3905 MVSDKKLVMNGSILAFVATPIMLLKAADYYWEIEVYIRLESAKFDIGHYSYSCVSEYRQQPTRRRRNLLKKKPVPTSSHILKGEKGKTGKSGNQVFIVINSEKKKSANSMDITCGTLSSLVDKFRDLVIDLTWEQLRYLFQYHRNIEELNERLEELTLERSSKQQQIDNAKKNLEQIEEKVEHWLGKVDEILEQTQMFHEEESQAKTECSVTSCPNLWLRYKLSKRAKAMAQQVVEIYGKGNFDRFSYPIPPASMPEVLIRESNEGIGSRTQILNQIMEHLHYPSVSIVGLSGLGGVGKTTIAKEVAKKAKNQTMFEKVIMATVSEELNIEKIQGEIAENLAFQLNEKSEGVRARRLCERLKLEKNMLLILDDLWEELDLGKVGIPFVDVGSYSKKNEGCKILLTSRNKMLLLNRMKCQEIIEVDVLSEDEALELFKRTSELPIDSSTPDNLISIASQIVRKCHGLTLAIATAAKALRGKNLGEWQEFYKRLNHPLRRNITGIKEVDAILKSSYDCLSSEKKRMFLLSAMLSHDPSIEDLLMYSMGLDILDGIEKIEDAHSGVSTTVGDLKSLNLFLDSFSSHRFTIHDVFRDVVLSITPNELNAFIVRHRSLTEWPDPKKLEDYKGICLQKSDISDLPEELHGSRLEFFLLDSTERDLAIPKMFFKSSKELKVLAFTNVNFSSLPSLMFLQKLKTLCLHSCLLEDIIEVRSLKKLKVLSLAYSEIQQLPIELAELTSLEMLNLAHCSKLKVIPPKLLSSFKKLGVLLMANSFHQWKVEGSTEANENASLDELKGLPICSLDIHIPNVSMLPENLFLDMNLMRYKILIGKHWKWWTVSYKTSKVLKLELESDIYLKPGVRKLMKGAEDLCLYGSNGLENVLHGHDGRSFLHLRHLQIESNDAIESIVWNSAHHEAATNNISNKMSESLLNKVLLPKLEILRLFNSISLIPLIWEDQLSHNSFRNLKTLFVKNCRFVKLVPLRVLRSFNNLEELKVNDCDTLELVFDFEDLNDYKEAESSSVIVPLKKLTLYKLRKLKNVWSNHYKGDVSFPSLRSVHVSSCESLASLFPASIAKGMLRDLEELRISDCGIEVIVAKDQVSESVAPLLEFPRLTLLELSSLKNLRNFYPQRHTLEWPHLYQLSIRSCDELEIFEKEVSSSLEIHKEGSSLDSKYPVLSQCKVLLPKIEILRLSNSIGLIPLIWEDQLSHNSFRNLKTLFVKNCRFVKLVPLRVLRSLNNLEELEVRDCDTLELVFDFEDLNDYKEAESSSVIVPLKKLTLYALRKLKNVWSNHYKGDVSFPSLRSVHVSFCDSLTSLFPASIAKGMLRDLEELRIEYCGIDVIVAKDQVSESIASTFEFPRLTLLELFWLQNLRNFYPQRHTLEWPHLYRLSIEFCDELEIFEKEVSSSLEIHEEWSSLDSKYPLLSQCKVTHNLEELTLESKGAEMIGSGQLSMYHFPKVKLLHLRADKTTTISYKLLLKSFPNLEEMTLAGHIKKASGGDDVPLPIKLTLKSISKITSLVPLLVSSPNLTHLKVTYCDELTTLMTSSVARSLVHLTSLSISGCDDIKEIIWKQEGEDDDDEEVVFSKLQHLKVERLPELKRFCRYNYTFRFPLLEQVIITGCPKFKVFSPGLIDTPSLKSVLLSQDMYGKPHEIWDTNLKNTFYQQRFVASREMVLDEYDVTMIRNDQFPVDCLAQVETLGIDGFDDEGATFPHTLLERFPRLTELRVEDSSFEEIFPSPIVHQNQLLHNLTVLKVSQCHQLIHLMTNSAAKTLVSLETLDIYYCEKMEKIVKNENNDDVEGGITFSALRRLKLMHLPRLKVEGHKMDFSIEDPATNNHKVYVFKIEGKFVIRAKYKEG 1860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5037g00009 1860 Gene3D Ribonuclease Inhibitor 587 825 IPR032675 -
Pral5037g00009 1860 Pfam NB-ARC domain 271 515 IPR002182 GO:0043531
Pral5037g00009 1860 Gene3D Ribonuclease Inhibitor 1673 1828 IPR032675 -
Pral5037g00009 1860 Gene3D Ribonuclease Inhibitor 1424 1653 IPR032675 -
Pral5037g00009 1860 SMART AAA_5 285 427 IPR003593 GO:0016887
Pral5037g00009 1860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 263 526 IPR027417 -
Pral5037g00009 1860 Gene3D - 427 518 IPR042197 -
Pral5037g00009 1860 Gene3D Ribonuclease Inhibitor 863 1089 IPR032675 -
Pral5037g00009 1860 PRINTS Disease resistance protein signature 361 375 - -
Pral5037g00009 1860 PRINTS Disease resistance protein signature 734 750 - -
Pral5037g00009 1860 PRINTS Disease resistance protein signature 463 477 - -
Pral5037g00009 1860 PRINTS Disease resistance protein signature 288 303 - -
Pral5037g00009 1860 SUPERFAMILY RNI-like 1271 1493 - -
Pral5037g00009 1860 Gene3D - 255 426 IPR027417 -
Pral5037g00009 1860 SUPERFAMILY RNI-like 1509 1795 - -
Pral5037g00009 1860 SUPERFAMILY L domain-like 587 1155 - -
Pral5037g00009 1860 FunFam Probable disease resistance protein At1g61300 252 419 - -
Pral5037g00009 1860 Gene3D Ribonuclease Inhibitor 1135 1420 IPR032675 -
Pral5037g00009 1860 Coils Coil 139 194 - -
Pral5037g00009 1860 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1406 1639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5037g00009 Pral-Chr5037 294688 321413 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5037g00009 286 754 WRKY Transcription Factor Family AT5G45050 23.970 1.13e-09 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5037g00009 - - pcin:129285257 1222.22