Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5037g00005 ATGAGATTGGTACGTGACTTCTGGGAGGCTGATGCTAGGAGGAAAAAAAGGTGTGTATCAGGTGGGGTTGTGGCAAGGAAGTTGAACTGGATATTGCCTGAGAAAAATACTATTAAATTGAATATTGACGCAGCTTTTAGTAAAGAGAGAGGAAAAGCCTCCGTAGGCATGGTTGCAAGAAATGATGAAGGTAGCTTTGTTGGTGGTTTTGGGAAGGAGGTAGTAGCAGATTCTGCGTTCATGGCCGAAAGTATGGCTCTGCTTGGGGCTTTAGAATGTTTTGATAAATTTAGCAGTGGGAGAGTAGTGGTGGAGACCGACTGTCAAATGCTATTTGACAAGCTACAGAAAAAGGAGATAACAGGATGTGAGTGGAGCTGTGAGGATATTCTGCAGAAGTGTCTCGTTTTGCTTGAGGATAGGTATAATTGGGTTCTGTCTTTAGTTGCAAGGAAAGGGAACAAGGCTGCTGATCATCTGGCGGCTGGAGTTTTGAGAAGAGTGGTACCGCAAGGATGGTTCAATGAACCACCACCTTCTCTGGAACCTTTGTTGCAGTTAGATTTAGTGCACAGATTGGATGAGGAGGAGGGGAGCAGCAGCAAGAAGAAGAAGAAGAAGCGTGTTCCAGCCATAGTAAAGATACCTAAGAGTGCACATTCAATGGATATCACTTGCGGAACATTGAGTAGTTTGGTTGACAAGTTCCGGGATCTAGTGATCGATCTAACTTGGGAGCAGCTTCGTTATCTGTTTCAGTATCACAGAAACATTGAGGAGCTCAATGAACGACTTAAGGAACTCACCCTTGAAAGAAGCTCCAAACAACAGCAAATAGATAATGCTAGAAACAATTTAGAACAAATTGAAGAGAAAGTTCAGCATTGGTTGCGCAAAGTAGATGAGATTTTAACGCAAACACAAATGTTTCATGAAGAAGAGAGTCAAGCAAAAACAGAGTGTAGCGTAACTTCCTGTCCCAACCTGTGGCTACGTTATAAACTAAGCAAAAAAGCAAAGGAAATGGCACAAGAAGCTGTTGAAATCTATGGAAAGAGAATCTTTGATAGAGTTTCATATCCTGTTCCTCCTGTATCGATGCCAGAATTACTCAGCAGAGAAAGCAATGAAGGGATTGGTTCAAGAACGCATATTGCGAATCAAATTATGGAGCACTTACATAATCCTAGTGTTGGTATTGTCGGATTGTGTGGGCTTGGTGGTGTTGGCAAGACCACTATAGCTAGAGAGGTAGCAAAGAAGGCGAAGAATCAAAACATGTTTGAAAAGGTGATCATGGCAACTGTTTCTAATGAATTCAACGTTGACAAGATTCAAGGCCAGATTGCAGAGAACCTGGGTATGCAGCTCAATGAAAAATCTGAAGGAGTAAGAGCTCGTCGTCTGTGTGAGAGATTGAAGCTAGAGAAGAATATGCTCCTAATATTGGATGATCTTTGGAAGGAACTTGATTTGGGCGAAATTGGAATTCCCTTTGTTGATGTTGGAAGTTATAGCAAAAAGAATGAAGGCTGCAAAATTTTACTAACTTCAAGGAATAAGAGTTTGCTGTCAAATGGCATGAAATGTCAAGAAATTATCGAAGTGGGTGTTTTGTCAGAGGATGAAGCATTAGAGTTGTTCAAGAGGATTGCTGAACTTTCTAATGACTCCAGCAGTCCTGACTTGATATTTATAGCCACTGAGATTGTTCGAAAGTGTCATGGCTTGCCACTACCGATTGCAACAGCTGCCAAGGCATTAAGGGGGAAAAATCTAGATGAGTGGCAAGATTACTGTGCACGATTGAATCATCCTTTAAGGAGAAACATCACAGGAATTAAAGAGGTGGATGCCATATTGAAGTTGAGCTACAATTGTCTAAGCTCAGAGAAAAAACATATTTTCTTGCTCGCTGCCATGCTGTCCCATGATCCCTCAATTGAAGACCTGCTCATGTACTCTGTAGGGTTAGATATTCTTGATGGCATAGAAAACATAAAAGATGCCCACGTTGGAATCTCTGCTGCAGTAAGCAAGCTAAAATCATTAAACTTATTTCTTGATAGCTTTTCTAGTCATCACGTTACAATACATGACGTCTTTCGAGATGTTGCATTATCGATTGCACCCAATGAATTAAATGCATTCATTGTTAGGGGTAGAAGCTTGAAAAAATGGCCAGACAAAAATAAGCTTGAAGACTACAAGGGAATTTGCTTACAAAAGAGTCACATTGGTGACTTTCCAGAAGAGCTGCATGGTCCAAGATTAGAATTCCTTCTGCTAGACAGCACAAAACGTGATTTGTCCATATCTAGCATGTTTTTCAAATCATCAAAGGAGCTGAAAGTGTTGGCATTTACCAATGTGCATTTTTCGTCACTACCATCACTCATTTTCCTGCAAAAACTAAAAACTTTGTGTCTCCATTCTTGTTTGCTAGAAGACATAATTGAGGTTAGAAGCTTGAAGAGGTTAGAAGTCCTAAGTCTTGCTTACTCTGAAATTCAACAACTACCTATTGAATTGGCAGAGTTAACTTCTTTACAAATGTTGAATTTAGCCCATTGCTCCAAGCTCAAAGTGATTCCACCAAAACTGCTATCGGGCTTTAAAAAATTGGAGGTTTTGCACATGGGAAATAGCTTTGACCAGTGGAAAGTTGAAGGATCTACTGAATCTAATGAAAACGCAAGTCTCGACGAGTTGAAGGGCTTGCCAATCTGTTCTCTAGATATTCATATTCCTCTTGCCTCTATGTTGCCGGAGAATTTGTTCTTAGATATGAATTTGATGAGATACAAAATTCTCATTGGGAAGCATTGGGACTGGAATGTCAACTATGAAAGTTCAAAGATATTGAAACTTGAGCTTAAGAGCAATGTCCATTTGAAGCCTGGAGTTCGAAAGTTGATGAAAGGAGCTGAAGATTTGTGTTTATATGGATCTAATGGGCTTGAAAATGTTCTACAGGGTCATGATGGAAGATCATTTCCACATTTAAGGCATCTTCAGATTGAAAGTAACGATACTATTGAATCTATTGTTTTGAACTCAGCACGTCATGAAGAAGCAACAAATAACGTATCCAATAAAATGTCTGAGTCACTTTTGAACAAGGTGTTGCTTTCAAAATTAGAGATATTGCAATTATCTAATTCGATCGATTTGATTCCAATGATATGGGATGACCAACTTTCACACAACTCATTTGGGAACTTGAAAACATTGTTTGTGAAAAATTGTGGCTTTGTGAAATTGGTGCCTCTTCGTGTGATGAAATCTTTAAACACCTTGGAAGAACTAGAAGTTAGGAACTGTGACATGTTGGAGTTGGTGTTTGATTTTGAAGATTTGAGTGATTATACAGAGGTGGAGTCATCATCAGTGATTGTGCCACTGAAAAAGTTAACGCTATCTAGTTTGCAAAAGTTGAAGAATGTGTGGAGCAATCACTATGAAGCAAATGTCTCCTTCCCAAGTCTAAGGAGCGTGCATGTTTCCTCTTGTGAAAGCCTCACAAGTCTGTTTCCTGCATCTATAGCCAAAGGCATGCTTTGTGATCTTGAAGAGCTTCGAATAGAATATTGTGGTATAGATGTGATTGCTGCGAAGGATCAAGTTTCAGAATCTGTTGCTCCTCTGTTAGAGTTTCCTAGGCTGACTTTCCTTAAGCTTTCTGGCCTTAAAAATTTGAGGAATTTCTATCCACAGAGACACACATTAGAATGGCCACACCTTTGTCGATTATCTATTAGAAGTTGTGATGAATTGGAGATATTTGAAAAGGAAGTCTCAAGTTCATTAGAAATACACGAGGAAGGGAGCTCATTAGACTCAAAATATCCTCTACTGTCCCATGACAAGGTCACTCATAATTTGGAGGAGTTGAGATTGGATGGTAAAGGAGCTGAGATGATAGGGAACGGCCAGCTTTCAACCTACCACTTCCCCAAAGTGAAGTTGCTTAGTCTAGATGTTGGTTATAAAGCAACGACTATTTCATACAAATTGTTGTTGAAGGGCTTTCCAAATTTAGAGGAGCTGAGATTGGCGGGTCACATTAAGGAGGCTTTTGGCAGAGGGGATGATGTCCCCCTTCCAATAAAATTGACTCTTGTCTGTATTTCCAAAATCACAAGCTTGGCACCACTCTTAGTTTCTCCACCAAATCTCACACATCTCCACGTGATGTATTGTCATCAGTTGACCACTTTGATGACATCATCAGTTGCTCGAAGCTTGGTCCATCTCACAAGTCTCTCAATTATCCATTGCTTTGAAATAAAGGAAATTATATGGAAGCAGGAAGGAGAGGATGACGACGATGAGGAAGTCGTTTTCAGCAAGTTGCAGTATTTGAACCTCGAAAGCTTACCAGGATTGAGGAGATTTTGCGGCTACAATTATACTTTCAAGTTTCCATTATTGGATCAGCTGATCATAACAGAATGTCCGAAATTCAAAGTATTCTCTCCAGGGCTCATTGAGACACCATCTCTTAAAAGAGTTCAAGTGTCACAAAATCGGAGGGTAAAACATCATGAAATTTGGGACCCCAATCTTAACAAAACATTCTACCAACAGAGATTTGTGACATCAAGAGAGATGGTGTTAGATGAGGATGATGTTAGCATGATAAGGAATGACCAATTTCCAGCGGATTGTTTTGCTCAAATGGAAATTCTGCGCATAGAAGGATTTGATGATGAAGGGGCAACATTTCCTGCTGAATGTGTTCCAATGCCATCAGCTCATCTATTTAATGACAAATTCAGCCGCCAAAAGTTTGGTGAATCTTGA 4806 0.3993 MRLVRDFWEADARRKKRCVSGGVVARKLNWILPEKNTIKLNIDAAFSKERGKASVGMVARNDEGSFVGGFGKEVVADSAFMAESMALLGALECFDKFSSGRVVVETDCQMLFDKLQKKEITGCEWSCEDILQKCLVLLEDRYNWVLSLVARKGNKAADHLAAGVLRRVVPQGWFNEPPPSLEPLLQLDLVHRLDEEEGSSSKKKKKKRVPAIVKIPKSAHSMDITCGTLSSLVDKFRDLVIDLTWEQLRYLFQYHRNIEELNERLKELTLERSSKQQQIDNARNNLEQIEEKVQHWLRKVDEILTQTQMFHEEESQAKTECSVTSCPNLWLRYKLSKKAKEMAQEAVEIYGKRIFDRVSYPVPPVSMPELLSRESNEGIGSRTHIANQIMEHLHNPSVGIVGLCGLGGVGKTTIAREVAKKAKNQNMFEKVIMATVSNEFNVDKIQGQIAENLGMQLNEKSEGVRARRLCERLKLEKNMLLILDDLWKELDLGEIGIPFVDVGSYSKKNEGCKILLTSRNKSLLSNGMKCQEIIEVGVLSEDEALELFKRIAELSNDSSSPDLIFIATEIVRKCHGLPLPIATAAKALRGKNLDEWQDYCARLNHPLRRNITGIKEVDAILKLSYNCLSSEKKHIFLLAAMLSHDPSIEDLLMYSVGLDILDGIENIKDAHVGISAAVSKLKSLNLFLDSFSSHHVTIHDVFRDVALSIAPNELNAFIVRGRSLKKWPDKNKLEDYKGICLQKSHIGDFPEELHGPRLEFLLLDSTKRDLSISSMFFKSSKELKVLAFTNVHFSSLPSLIFLQKLKTLCLHSCLLEDIIEVRSLKRLEVLSLAYSEIQQLPIELAELTSLQMLNLAHCSKLKVIPPKLLSGFKKLEVLHMGNSFDQWKVEGSTESNENASLDELKGLPICSLDIHIPLASMLPENLFLDMNLMRYKILIGKHWDWNVNYESSKILKLELKSNVHLKPGVRKLMKGAEDLCLYGSNGLENVLQGHDGRSFPHLRHLQIESNDTIESIVLNSARHEEATNNVSNKMSESLLNKVLLSKLEILQLSNSIDLIPMIWDDQLSHNSFGNLKTLFVKNCGFVKLVPLRVMKSLNTLEELEVRNCDMLELVFDFEDLSDYTEVESSSVIVPLKKLTLSSLQKLKNVWSNHYEANVSFPSLRSVHVSSCESLTSLFPASIAKGMLCDLEELRIEYCGIDVIAAKDQVSESVAPLLEFPRLTFLKLSGLKNLRNFYPQRHTLEWPHLCRLSIRSCDELEIFEKEVSSSLEIHEEGSSLDSKYPLLSHDKVTHNLEELRLDGKGAEMIGNGQLSTYHFPKVKLLSLDVGYKATTISYKLLLKGFPNLEELRLAGHIKEAFGRGDDVPLPIKLTLVCISKITSLAPLLVSPPNLTHLHVMYCHQLTTLMTSSVARSLVHLTSLSIIHCFEIKEIIWKQEGEDDDDEEVVFSKLQYLNLESLPGLRRFCGYNYTFKFPLLDQLIITECPKFKVFSPGLIETPSLKRVQVSQNRRVKHHEIWDPNLNKTFYQQRFVTSREMVLDEDDVSMIRNDQFPADCFAQMEILRIEGFDDEGATFPAECVPMPSAHLFNDKFSRQKFGES 1601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5037g00005 1601 Coils Coil 251 306 - -
Pral5037g00005 1601 Gene3D - 367 537 IPR027417 -
Pral5037g00005 1601 SUPERFAMILY L domain-like 698 1266 - -
Pral5037g00005 1601 Gene3D Ribonuclease Inhibitor 702 905 IPR032675 -
Pral5037g00005 1601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 376 637 IPR027417 -
Pral5037g00005 1601 Gene3D - 538 629 IPR042197 -
Pral5037g00005 1601 ProSiteProfiles RNase H type-1 domain profile. 34 166 IPR002156 GO:0003676|GO:0004523
Pral5037g00005 1601 Pfam Reverse transcriptase-like 41 162 IPR002156 GO:0003676|GO:0004523
Pral5037g00005 1601 CDD RNase_H_like 40 161 IPR044730 -
Pral5037g00005 1601 Gene3D - 36 165 IPR036397 GO:0003676
Pral5037g00005 1601 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1291 1503 - -
Pral5037g00005 1601 FunFam Probable disease resistance protein At1g61300 364 531 - -
Pral5037g00005 1601 Gene3D Ribonuclease Inhibitor 1290 1526 IPR032675 -
Pral5037g00005 1601 SUPERFAMILY Ribonuclease H-like 36 169 IPR012337 -
Pral5037g00005 1601 Pfam NB-ARC domain 386 626 IPR002182 GO:0043531
Pral5037g00005 1601 SMART AAA_5 397 539 IPR003593 GO:0016887
Pral5037g00005 1601 Gene3D Ribonuclease Inhibitor 931 1274 IPR032675 -
Pral5037g00005 1601 SUPERFAMILY RNI-like 1292 1515 - -
Pral5037g00005 1601 PRINTS Disease resistance protein signature 400 415 - -
Pral5037g00005 1601 PRINTS Disease resistance protein signature 574 588 - -
Pral5037g00005 1601 PRINTS Disease resistance protein signature 845 861 - -
Pral5037g00005 1601 PRINTS Disease resistance protein signature 473 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5037g00005 Pral-Chr5037 123552 139377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5037g00005 401 865 WRKY Transcription Factor Family AT5G45050 22.761 1.36e-12 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5037g00005 - - pcin:129285257 969.148