Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5037g00003 ATGGATATCACTTGCGGAACATTGAGTAGTTTGGCTGACAAGTTCCGGGATCTAGTGATCGATCTAACTTGGGAGCAGCTTCGTTATCTGTTTCAGTATCACAGAAACATTGAGGAGCTCAATGAACGACTTAAGGAACTCACCCTTGAGAGAAGCTCCAAACAACAGCAAATAGATAATGCTAGAAAAAATTTAGAACAAATTGAAGAGAAAGTTCAGCATTGGTTGCGCAAAGTAGATGAGATTTTAACGCAAACACAAATGTTTCATGAAGAAGAGAGTCAAGCAAAAACAGAGTGTAGCGTGACTTCCTGTCCCAACCTGTGGCTACGTTATAAACTAAGCAAAAGAGCAAAGGAAATGGCACAGCAAGTTGTTGAAATCTATGGGAAGAGAAACTTTGATAGGGTTGCATATCCTGTTCCTCCCCCATCGATGCCAGAATTACTCAACAGAAAAAGCAATGAACGGATTGGTTCTAGAACGCAAATTGTGAATCAAATTATGGAGCTCTTAGATAATCCTAGTGTTAATATTGTCGGATTGTGTGGGCTTGGCGGTGTTGGCAAGACCACTATAGCTAAAGAGGTGGCAGAGAAGGCGAAGAATCAAAACATGTTTAAAAAGGTGATCATGGCAACTGTTTCTAATGAATTGGACGTTGAGAAGATTCAAGGCCAGATTGCAGAGAAGCTGGGTTTTCAACTCAATGAAAAATTTGAAGTAAGAGCTTATCGTCTATGTGAAAGGTTGAAGCAAGAGGAGAATATGCTCCTAATATTGGATGATCTTTGGAAGGAACTTGATTTAGGCGAAGTTGGAATTCCCTTTGTTGATGTTGGAAGTTCTAGCAAAAAGAATGAACGCTGCAAAATTTTACTAACTTCAAGGAATAAGAGTTTGCTGTCAAATGGCATGAAATGTCAAAAAATTATCGAAGTGGACGTTTTGTCAAAGGATGAAGCATTAGAGTTGTTCAAGAGGATTTCTGAACTTCCTATTGACTCAAGCACTCCTGACAACTTGATATCTATAGCCTATCAGATTGTTCGAAAGTGTCATGGCTTGACATTAGCGATTGCAGCAGCTGCCAAGGCACTAAAGGGAAAAAATCTAGATGAGTGGCAAGATTTCTGTAAACGATTGAATCATCCTTTAAGGAGAAACATCACAGGAATTAAAGAGGTGGATGTGATATTGAAGTCGAGTTATGATTGTCTAAGCTTAGAGAAAAAACGTATCTTCTTGCTCTCCGCCATGCTGTCCCATGATCCCTCAATTGATGACCTGCTCATGTACTCTATGGGCTTTTCTAGTCATTACTTTACAATACATGATGTCTTTCGAGATCTTGCAATATCGATTGCAACCAATGAATTAAATGCATTCATTGTGAGGCATGGAAGCTTGAAAGAATGGCCTGAAAAAAATAAGCTTGAAGACTACAAGGGAATTTGCTTGCAAAAGAGTGACATCAGTGACCTTCCAGAAGAGCTTCATGGTCCAAGATTAGAATTCTTTCTGCTAGACAGCACAAAACGTGATTTGGCCATACCTAGGATGTTTTTCAAATCATCAAAGGAGCTGAAAGTAAACATAATTGAGGTTGGAAGCTTGAAGAAGTTAGAAGTCCTAAGTCTTGCTTACTCTGAAATTCAACAACTACCTATTGAATTGGCAGAGTTAACTTCTTTACAAATGTTGAATTTAGCCCATTGCTCCGAGCTCAAAGTGATTCCACCAAAACTGCTATCTAGCTTCAAAAAATTGGGGGTTTTGCTTATGGGAAATAGCTTTCACCAGTGGAAAGTTGAAGGATCTACTGAAGCTAATGAAAACGCGAGTCTTGACGAGTTGAAGGGCTTGCCAATCTGTTCTCTAGATATTCATATTCCTAATGTCTCGATGTTGCCGGAGAATTTGTTCTTAGATATGAATTTGATGAGATACAAAATACTCATTGGGAAGCACTGGAAATGGTGGACGGTCAGCTATAAAACTTCAAAGGTATTGAAACTTGAGCTTGAGAGTGATATCTATTTGAAGCCTGGGGTTCGAAAGTTGATGAAAGGAGCTGAAGATTTGTGTTTATATGGATCTAATGGGCTTGAAAATGTTCTACATGGTCATGATGGAAGATCATTTCTGCATTTAAGGCATCTTCAGATTGAAAGTAACGATGCTATTGAGTCCATTGTTTGGAACTCAGCACATCATGAAGCAGCAACAAATAACATATCCAATAAAATGTCTGAGTCGCTTTTGAACAAGGTGTTGCTTCCAAAATTAGAGATAGTGCGATTATCTAATTCAATCGGTTTGATTCCATTGATATGGGAGGACCAACTTTCACACAACTCATTTAGGAACTTGAAAACATTGTTTGTGGAAAATTGTGGCTTTGTGAAATTGGTGCCCCTTCGTGTGCTGAAATCTTTAAACAACTTGGAAGAACTAGAAGTTAGGGAGCTGTGA 2475 0.3883 MDITCGTLSSLADKFRDLVIDLTWEQLRYLFQYHRNIEELNERLKELTLERSSKQQQIDNARKNLEQIEEKVQHWLRKVDEILTQTQMFHEEESQAKTECSVTSCPNLWLRYKLSKRAKEMAQQVVEIYGKRNFDRVAYPVPPPSMPELLNRKSNERIGSRTQIVNQIMELLDNPSVNIVGLCGLGGVGKTTIAKEVAEKAKNQNMFKKVIMATVSNELDVEKIQGQIAEKLGFQLNEKFEVRAYRLCERLKQEENMLLILDDLWKELDLGEVGIPFVDVGSSSKKNERCKILLTSRNKSLLSNGMKCQKIIEVDVLSKDEALELFKRISELPIDSSTPDNLISIAYQIVRKCHGLTLAIAAAAKALKGKNLDEWQDFCKRLNHPLRRNITGIKEVDVILKSSYDCLSLEKKRIFLLSAMLSHDPSIDDLLMYSMGFSSHYFTIHDVFRDLAISIATNELNAFIVRHGSLKEWPEKNKLEDYKGICLQKSDISDLPEELHGPRLEFFLLDSTKRDLAIPRMFFKSSKELKVNIIEVGSLKKLEVLSLAYSEIQQLPIELAELTSLQMLNLAHCSELKVIPPKLLSSFKKLGVLLMGNSFHQWKVEGSTEANENASLDELKGLPICSLDIHIPNVSMLPENLFLDMNLMRYKILIGKHWKWWTVSYKTSKVLKLELESDIYLKPGVRKLMKGAEDLCLYGSNGLENVLHGHDGRSFLHLRHLQIESNDAIESIVWNSAHHEAATNNISNKMSESLLNKVLLPKLEIVRLSNSIGLIPLIWEDQLSHNSFRNLKTLFVENCGFVKLVPLRVLKSLNNLEELEVREL 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5037g00003 824 Pfam NB-ARC domain 162 405 IPR002182 GO:0043531
Pral5037g00003 824 SUPERFAMILY L domain-like 444 819 - -
Pral5037g00003 824 Gene3D - 317 408 IPR042197 -
Pral5037g00003 824 Gene3D Ribonuclease Inhibitor 527 823 IPR032675 -
Pral5037g00003 824 Gene3D - 147 316 IPR027417 -
Pral5037g00003 824 Coils Coil 30 85 - -
Pral5037g00003 824 PRINTS Disease resistance protein signature 251 265 - -
Pral5037g00003 824 PRINTS Disease resistance protein signature 560 576 - -
Pral5037g00003 824 PRINTS Disease resistance protein signature 179 194 - -
Pral5037g00003 824 PRINTS Disease resistance protein signature 353 367 - -
Pral5037g00003 824 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 28 823 - -
Pral5037g00003 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 416 IPR027417 -
Pral5037g00003 824 SMART AAA_5 176 317 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5037g00003 Pral-Chr5037 56627 60021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5037g00003 156 440 WRKY Transcription Factor Family AT5G45050 27.331 1.02e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5037g00003 - - pcin:129285257 790.03