Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5036g00020 ATGGCTACGGTGAACAGTGTGGTCTGCTGCTTCTATTTCGTCCTGGTTAACATTTTGTTATGCTCTCTGCCAACTCAATCAGCTCCTGAAGGTGCTCTCATAACAGAGATTCCTGGATTTAATGGCACTATACCTTCCAAGCATTATGGCGGTTATGTGACGGTGGATGAAAGTCATGGGAGGAGCCTGTATTATTACTTTGTGGTATCAGAAAGCAATCCATCTGAGGATCCTGTGGTTTTATGGCTGAACGGCGGGCCCGGATGCTCTAGCTTCGATGCCTTCGTATACGAGCATGGTCCTTTCAATTTTGAAAAGGCCAAAACCAAGGGATCCTTGCCTACATTGCACCTAAATCCTTACAGCTGGTCAAAGGTCTCCAACATTATATATTTGGATTCTCCAGCTGGTGTGGGGTTTTCTTTCTCAAAGAATAAATCCGATTACATAACTGGAGACATAAAGACTGCTTCAGATACACACACCTTTCTCCTTAAGTGGTTTGAACTCTATCCTGAGTTCCTTTCTAATCCATTCTTCATTGCTGGAGAGTCATATGCCGGAATTTATGTACCTACACTAGCTTATGAAGTAATGAAAGGAATTGAAGCTGGTGCAAGGCCCAACCTTAATTTCAAGGGATATTTGGTTGGAAACGGCTGTACAGATGATGAGTTTGATGGCAATGCTCTTGTTCCATTTGCACATGGGATGGGTCTCATCTCAGATGAATTGTATGAGGAGGTTAGAGTTGAGTGCAATGGGAATTTCTATAATCCATTGAATGAAAATTGTGCAAGCAAGCTAGCAAAAGTTGATCAGGAGATTGATGGTTTAAACATATATGACATTCTAGAACCATGCTATCATTGGCCGGAGACAATAGAGACCACACCATCCTATATCAGGTTGCCATCCAGTTTCCGGCAGTTGGGTGAGACCAAGAGACCTCTACCTGTGAGAAAAAGGATGTTTGGTCGTGCTTGGCCCCTTAGAGCTCCCGTGAGAGATGGAATTGTGCCAACTTGGCCGCAACTCAGCAATAGCCACAACGTTCCATGCACTGATGACGAGGTCGCAAACTCATGGCTGAACAATGACATAGTCAGGAAAGCAATTCACACCGCAGAGAAAGCTGATGTCAGTATTTGGGATTTATGCACGGGCAATATTTTCTACGATCATGATGCTGGGAGCATGATCAAATTCCATAAGAACCTGACATCCAGAGGATATCGAGCACTTATATACAGCGGGGATCATGATATGTGTGTTCCATTCACTGGAAGTCAAGCATGGACTAGATCAATGGGATATAAAGTTGTGGATGGTTGGAGGCCATGGATAGTCAATAATCAAGTTGCTGGTTATACACAAGGATATGATAAAAATCTCACCTTTATGACCATAAAGGGAGCTGGACACACTGTTCCAGAATATAAGCCACAAGAGTCATTGTATTTCTACAAGCGCTTTCTGGATGGATTGCCGATATAG 1497 0.4329 MATVNSVVCCFYFVLVNILLCSLPTQSAPEGALITEIPGFNGTIPSKHYGGYVTVDESHGRSLYYYFVVSESNPSEDPVVLWLNGGPGCSSFDAFVYEHGPFNFEKAKTKGSLPTLHLNPYSWSKVSNIIYLDSPAGVGFSFSKNKSDYITGDIKTASDTHTFLLKWFELYPEFLSNPFFIAGESYAGIYVPTLAYEVMKGIEAGARPNLNFKGYLVGNGCTDDEFDGNALVPFAHGMGLISDELYEEVRVECNGNFYNPLNENCASKLAKVDQEIDGLNIYDILEPCYHWPETIETTPSYIRLPSSFRQLGETKRPLPVRKRMFGRAWPLRAPVRDGIVPTWPQLSNSHNVPCTDDEVANSWLNNDIVRKAIHTAEKADVSIWDLCTGNIFYDHDAGSMIKFHKNLTSRGYRALIYSGDHDMCVPFTGSQAWTRSMGYKVVDGWRPWIVNNQVAGYTQGYDKNLTFMTIKGAGHTVPEYKPQESLYFYKRFLDGLPI 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5036g00020 498 Gene3D - 350 497 - -
Pral5036g00020 498 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Pral5036g00020 498 FunFam Carboxypeptidase 27 311 - -
Pral5036g00020 498 Pfam Serine carboxypeptidase 38 495 IPR001563 GO:0004185|GO:0006508
Pral5036g00020 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Pral5036g00020 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Pral5036g00020 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Pral5036g00020 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 465 478 IPR001563 GO:0004185|GO:0006508
Pral5036g00020 498 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 482 IPR001563 GO:0004185|GO:0006508
Pral5036g00020 498 Gene3D alpha/beta hydrolase 26 323 IPR029058 -
Pral5036g00020 498 SUPERFAMILY alpha/beta-Hydrolases 34 497 IPR029058 -
Pral5036g00020 498 FunFam Carboxypeptidase 353 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5036g00020 Pral-Chr5036 200788 207169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5036g00020 359 498 Calmodulin-binding Proteins AT2G22960 49.286 1.44e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5036g00020 K16296 - gmx:100792057 833.558