Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5036g00017 ATGTTTTCTTTGGCCTCTTCATCATCCTCTCAGTCCAAACCCAAATTGACTTTCGAATACGATGTCTTCTTCACTTTCGATGGTTTGGGAAGTCGTCTGAGAACCTTTCTTGAGAAATGTTTGAGTGACGCAGGAATGAAAACTTGCATTCATGACATGGTCAGGGATTACTCCAGATGGAGGATGATAGAAAGGTGTAGAATTGTGATGGTGGTAATCACACCAGAGTTGGTTGCGTCCGACATATGTCTTGACAGATTGAAGAAAATAATATCGTATCCCAAAACAGTGCTTCCTTTGTTCTATGGAGTGAGCCACGACGAATTTCGTATGCAGTTCGAGAGTTTCTATTTGCGAAAATTTCGCATTGAAGGAATTCCCGATGGAGCGAATCTCAGTGAATTGAGTGAAGCTTACGGATTGAGATTATGGGAATTTGGGGGTTATCGGAATCCGCAACGAAGAGCCAACGCTGAGTGTTCTTCGCTATATGGCTTCACACTGTCGCATGATTTTGGAATTGAGGCTGAGTTACTTGATGATGTTGTTAAAACTATCACAATGAGGCTAGACAATAGGGAATATATTTTCGTTGCTCACCATCCAGTCGGTTTAGAGTCTCGCATGCAAGATATCATCCAATTTCTAAGTGAATCAAATGGGATTACCATAATAGGCATTTGGGGGATGGGAGGGATTGGTAAGACGACGATGGCTAAAACTATCTATAATGAAATGGGGCAAAGCTTTGTGGGAAAGAGTTTCCTAGCAAATATTAGGGAAGTATGGAAGCAAGACAATGGTCAAGTTTATTTGCAAGGACAACTTCTCTCTAGCATCTTAAGAACAAGAAGGATCAACCTACTGAATGTAGGGATAGGAAAATCTATAATCAAGCAAAGTCTCTGTCAAAAAAGAGTATTTCTTGTATTGGATGATGTGGATAATGAAGACCAACTCAAAGTGTTATGTGGCAGTCGTCAGTGGTTTGGTCATGGTAGTAGAATAATTATTACTACAAGAGATGAACGCCTACTTCAGATCCTTCAAGTGGATAAAGTATTTAATGTGAGGGGAATGGATGATAATGAATCTATTGAGCTTTTCAGCTGGCATGCTTTTAAGCAAGCGCTTCCTGAAAGAAATTTCACTGAACTTTCAAGAAAGGTAGTAGCATACTGTAGAGGTCTGCCACTAGCTCTTGAAATCCTTGGCTCATATTTGTTTGATAGGAAAATACCTTATTGGGAAAGCACTTTGAGTAAATTGGAACGAATTCCAGATGGTAAAATATATGAAATTCTAAAAATAAGTTATGATGATTTGAGTGAACAAATAGAGAAAGAGCTTTTCTTGGACATATGTTGTTTTTTCATTGGGAAAGACAGAAGCTATGCTATTCAGGTATTAGATGGTTGTGGACTTTATGCAGAAACTGGAATTACCCATCTAATTGAGCGAAGCCTAGTAAAGGTTGTAAAATCTGGAAACAAAAGCATACTTGATATGCATGGCTTAATACGTGATATGGGAAGAGAAATCATTCGTGGGCAATCACCAGAGGAGCCAGAAAAGCGTACAATATTATGTTTTAACGATGAGGTGTTGGATGTGTTAGAAAGCAACACTGGAACAATAGCTACCAAGGGATTATCATTAAAAATGCCAAGAAGCAATTCAGTATCCTTCGGTACAAATGCATTTAAGAATATGAAGAGGCTTCGTTTACTCAATCTTGATAATGTACAGCTTAATGGAGAATATGATTATCTATCAAAAGAATTGAGATGGCTTTGTTGGCGTGGATTTCTCTTAGAGAGTTTGCCAACAGACTTTAATGTAAAGAAGATAGTCGCCATTGACTTAAAGTGGAGTAATCTCACAAAAGTGTGGGAGAAAAGTCAGGTGCTGGAATCCTTGAAAACTCTCAATGTGAGTCATTCTCATTACCTAACAGAAACACCTGACTTTTCAAAATTACCACATCTTGAGAAGTTGATACTTAAAGACTGTCCACGTTTGTCTATGATTCACCCTTCCATTGGAAATCTTAGGCATCTTATTATGTTGAATTTGAAAAATTGCATTGGCTTAGAGCATCTCCCAAGAAGTATATATGACTTGAAATCTTTGAGAACTCTCAATCTTTTTGGTTGTTCAAAGATTGAAAGGTTGGATGAAGACATTGAGAAAATGGAATCCTTAACGGTTTTGGTGGCAACTCAAACTGCTATAACACAAGCACCCATCTCACTGGTGAGATTAAAGAACATTAAATATGTTTCTTTATGTGGTTATGAAGGATTGTCACGTGATGTATTTCCATCTCTTATTTTGTCTTGGATGCCCCCAACAAATCATTCAAAGTCCTTGTTTCAAGCATTTAGGATCATGCCATCGTTAATCAAGATTCTTTCACATCCTTTGTTTACCAAAAGTTGTGAAATGTTTAAAGCAAAACAACGATCATCTCAAGCTTCATGTAAAAAGACTCCAGCATTGATTGGTTTTGGCGAGCAAGTTCACAAGGAAAGATCAAAAACATTCATGAGTTCTATAACAATTCATGTAGGCGAGTTCAACGAAGTTATAAACACACTTTTAAGGAGCATTTCACAGGGATGGAATGAAAAAGGATTTGGAGTTAATTCTCTTCCCGGAGACAATTATCCTCATTGGCAGAATTTCAAAGGTGAAGGATGTTCAATATGCTTTGAAGTTCCTAAAATTATTGGCAGAAGCTTAAAAGGATTGATTCTGTGCATAATCTATTTGTCTTCTCAAGACAACATGACGTCTGTATATTATCCTGTTGGTGTCCTGGTATCAAATCATACAAAGGGTACCATTAAATTGTACCAAAAAGATGCAACAACTGCTTCAAATGATGAAGATAATTGGCAAGACATCATCTCTAATTTGGAGACTGGTAACAGAGTGGAGGTTATAGTCACTTTTGCTTGTGAATTGAAAGTAAAACACACAGTTGTCTATTTGGTATATGATGAAGACGCTATTAAGAGAATCATGTACTGA 3036 0.3745 MFSLASSSSSQSKPKLTFEYDVFFTFDGLGSRLRTFLEKCLSDAGMKTCIHDMVRDYSRWRMIERCRIVMVVITPELVASDICLDRLKKIISYPKTVLPLFYGVSHDEFRMQFESFYLRKFRIEGIPDGANLSELSEAYGLRLWEFGGYRNPQRRANAECSSLYGFTLSHDFGIEAELLDDVVKTITMRLDNREYIFVAHHPVGLESRMQDIIQFLSESNGITIIGIWGMGGIGKTTMAKTIYNEMGQSFVGKSFLANIREVWKQDNGQVYLQGQLLSSILRTRRINLLNVGIGKSIIKQSLCQKRVFLVLDDVDNEDQLKVLCGSRQWFGHGSRIIITTRDERLLQILQVDKVFNVRGMDDNESIELFSWHAFKQALPERNFTELSRKVVAYCRGLPLALEILGSYLFDRKIPYWESTLSKLERIPDGKIYEILKISYDDLSEQIEKELFLDICCFFIGKDRSYAIQVLDGCGLYAETGITHLIERSLVKVVKSGNKSILDMHGLIRDMGREIIRGQSPEEPEKRTILCFNDEVLDVLESNTGTIATKGLSLKMPRSNSVSFGTNAFKNMKRLRLLNLDNVQLNGEYDYLSKELRWLCWRGFLLESLPTDFNVKKIVAIDLKWSNLTKVWEKSQVLESLKTLNVSHSHYLTETPDFSKLPHLEKLILKDCPRLSMIHPSIGNLRHLIMLNLKNCIGLEHLPRSIYDLKSLRTLNLFGCSKIERLDEDIEKMESLTVLVATQTAITQAPISLVRLKNIKYVSLCGYEGLSRDVFPSLILSWMPPTNHSKSLFQAFRIMPSLIKILSHPLFTKSCEMFKAKQRSSQASCKKTPALIGFGEQVHKERSKTFMSSITIHVGEFNEVINTLLRSISQGWNEKGFGVNSLPGDNYPHWQNFKGEGCSICFEVPKIIGRSLKGLILCIIYLSSQDNMTSVYYPVGVLVSNHTKGTIKLYQKDATTASNDEDNWQDIISNLETGNRVEVIVTFACELKVKHTVVYLVYDEDAIKRIMY 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5036g00017 1011 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 749 IPR044974 GO:0006952
Pral5036g00017 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 454 IPR027417 -
Pral5036g00017 1011 FunFam Disease resistance protein (TIR-NBS-LRR class) 361 443 - -
Pral5036g00017 1011 SUPERFAMILY L domain-like 551 909 - -
Pral5036g00017 1011 Pfam NB-ARC domain 206 439 IPR002182 GO:0043531
Pral5036g00017 1011 SUPERFAMILY "Winged helix" DNA-binding domain 430 519 IPR036390 -
Pral5036g00017 1011 PRINTS Disease resistance protein signature 394 408 - -
Pral5036g00017 1011 PRINTS Disease resistance protein signature 706 722 - -
Pral5036g00017 1011 PRINTS Disease resistance protein signature 224 239 - -
Pral5036g00017 1011 PRINTS Disease resistance protein signature 301 315 - -
Pral5036g00017 1011 Gene3D - 192 354 IPR027417 -
Pral5036g00017 1011 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 120 IPR035897 -
Pral5036g00017 1011 Gene3D Ribonuclease Inhibitor 540 805 IPR032675 -
Pral5036g00017 1011 Gene3D - 360 443 IPR042197 -
Pral5036g00017 1011 Gene3D - 15 191 IPR035897 -
Pral5036g00017 1011 SMART till_3 19 142 IPR000157 GO:0007165
Pral5036g00017 1011 ProSiteProfiles TIR domain profile. 18 139 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5036g00017 Pral-Chr5036 179527 186804 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5036g00017 203 723 WRKY Transcription Factor Family AT5G45050 32.668 1.06e-71 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5036g00017 - - pcin:129288830 1138.25